DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and trpc7b

DIOPT Version :9

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:NP_001276815.1 Gene:trpc7b / 102725540 ZFINID:ZDB-GENE-140129-2 Length:844 Species:Danio rerio


Alignment Length:822 Identity:287/822 - (34%)
Similarity:437/822 - (53%) Gaps:108/822 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LLLEEKKFLLAVERGDMPNVRRILQKALRHQHININCMDPLGRRALTLAIDNENLEMVELLVVMG 102
            |..||::|:.|.|.|::|.||::|.::   :.:|.||:|.:|:.||.||:.||:||:.|||:...
Zfish    31 LTAEEERFMDAAEYGNIPVVRKMLDES---KTLNFNCVDYMGQNALQLAVGNEHLEVTELLLKKD 92

  Fly   103 --VETKDALLHAINAEFVEAVELLLEH---------------EELIYKEGEPYSWQKVDINTAMF 150
              ....||||.||:..:|..||.:|.|               :||  ::.:.|::   |.:...|
Zfish    93 GMARIGDALLLAISKGYVRIVEAILAHPAFAGGLRLTLSPLEQEL--RDDDFYAY---DEDGTRF 152

  Fly   151 APDITPLMLAAHKNNFEILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALC 215
            :.|:||::||||...:||:.|||.:||.:..|||..|.|.||:.....||..||.||:|.|:.|.
Zfish   153 SHDVTPVILAAHCQEYEIVHILLMKGARIERPHDYFCKCNECMEKQRRDSFSHSRSRMNAYKGLA 217

  Fly   216 SPSLICLTSNDPIITAFQLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIIL 280
            |.:.:.|:|.||::||.:||.||..||..|.|.|::|..|..||:.|.|.:||..|.:.|:..||
Zfish   218 SAAYLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAIL 282

  Fly   281 NYDPQMSSYEPGDRMSLTRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIA 345
            |.|...:......|..|:|:..:|.|:.||||||.|.||.|.:|||:.|.|.|::||..|.:.:.
Zfish   283 NGDVDQNPPAELQRPCLSRIKLSIKYEVKKFVAHPNCQQQLLTIWYENLSGLRQQSIGVKCLTVL 347

  Fly   346 QVAVLFPLYCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVRIFGTTR 410
            .|.|..|...:.|...|..:.||::|.|||||:.||.|:..||.:|:|   .|.|   |..|...
Zfish   348 GVTVGLPFLAIAYWIMPCSKLGQILRSPFMKFVAHAVSFTIFLALLVL---NASD---RFEGVKN 406

  Fly   411 MKKELAEQELRQ--RGQTP--SKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNS 471
            :..|......||  |.:|.  |..||:::.:|:|.:|.|.:||:..|.:.|:.::||.:||...|
Zfish   407 LPNETITDHPRQVFRVKTTQFSWTELLIMKWVLGMIWSECKEIWVDGPREYVMHLWNVLDFGMLS 471

  Fly   472 LYVSVMCLRAFAYIQQA---------------TEIARDPQMAYI--PREKWHDFDPQLIAEGLFA 519
            ::|:....|..|:::.:               :..:....:||.  .|.:|...|||:|:|||:|
Zfish   472 IFVASFTARLMAFLKASKAQLYVDLHVPNHDISNASLPADVAYFTYARNRWRPSDPQIISEGLYA 536

  Fly   520 AANVFSALKLVHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFACGLNQLLWYFAALEKS 584
            .|.|.|..::.::...|...|||||||||.|.||.||..|:.:|..||..|:..|..|:...:.:
Zfish   537 IAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKYN 601

  Fly   585 KCYVLPGGEADWGSHGDSCMKWRRFGNLFESSQSLFWASFGMVGLDDFELSGIKSYTRFWGLLMF 649
            ..                      |..:.||.::|||:.||:..:....|.....:....|.:::
Zfish   602 PA----------------------FTTVEESFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLY 644

  Fly   650 GSYSVINVIVLLNLLIAMMSNSYAMIDEHSDTEWKFARTKLWMSYFEDSATLPPPFNVLPSVK-- 712
            |.|:|..|:||||:||||:::||..|:|.:|.||||||.|||:|||::..|||.|||::|:.|  
Zfish   645 GVYNVTMVVVLLNMLIAMINSSYQEIEEDADVEWKFARAKLWLSYFDEGRTLPAPFNLVPTPKSF 709

  Fly   713 --WVIRI----------------------FRKSSKTIDRQRSKKRKEQEQF--------SEYDNI 745
              .:|||                      ...|.:.:||.|...|..:|..        :.|..|
Zfish   710 YYLIIRIKTCLIHLCKGKAHRHDSELEMGMINSRQKVDRHRVNLRSREESTLKKPIKHPTRYQKI 774

  Fly   746 MRSLVWRYVAAMHRKFENNPVSEDDINEVKSEINTMRYEMLE 787
            |:.|:.|||.......||:.|:|.::.|:|.:|:::|||:||
Zfish   775 MKRLIKRYVLKAQVDRENDEVNEGELKEIKQDISSLRYELLE 816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 trp 48..784 CDD:273311 279/807 (35%)
ANK 48..195 CDD:238125 60/163 (37%)
ANK repeat 78..114 CDD:293786 17/37 (46%)
ANK repeat 134..177 CDD:293786 15/42 (36%)
TRP_2 187..246 CDD:285535 26/58 (45%)
DUF2031 <706..>805 CDD:299055 31/116 (27%)
trpc7bNP_001276815.1 trp 18..813 CDD:273311 283/817 (35%)
ANK repeat 38..66 CDD:293786 11/30 (37%)
ANK 41..175 CDD:238125 49/141 (35%)
ANK repeat 68..99 CDD:293786 12/30 (40%)
ANK repeat 100..146 CDD:293786 13/50 (26%)
ANK repeat 148..183 CDD:293786 15/34 (44%)
TRP_2 189..247 CDD:285535 26/57 (46%)
TPX2_importin 724..>794 CDD:289022 15/69 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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