DRSC/TRiP Functional Genomics Resources

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Protein Alignment trpl and trpc6b

DIOPT Version :10

Sequence 1:NP_476895.1 Gene:trpl / 36003 FlyBaseID:FBgn0005614 Length:1124 Species:Drosophila melanogaster
Sequence 2:XP_002665445.3 Gene:trpc6b / 102725535 ZFINID:ZDB-GENE-081030-19 Length:858 Species:Danio rerio


Alignment Length:840 Identity:289/840 - (34%)
Similarity:453/840 - (53%) Gaps:105/840 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 EKKFLLAVERGDMPNVRRILQKALRHQHININCMDPLGRRALTLAIDNENLEMVELLVVMG--VE 104
            |::||.|.|.|::|.:||:|::.   ..:|:||:|.:|:.||.||:.||:||:.|||:...  ..
Zfish    67 EERFLEAAEYGNIPVIRRMLEEL---PELNVNCVDYMGQNALQLAVANEHLEVTELLLKKENLAR 128

  Fly   105 TKDALLHAINAEFVEAVELLLEHEEL----------IYKEGEPYSWQKVDINTAMFAPDITPLML 159
            ..||||.||:..::..||.:|.|:..          :..|.:. .:...|.:...|:.||||::|
Zfish   129 IGDALLLAISKGYIRIVEAILSHQAFADTTKLTSSPLQAETQD-DFFAYDEDGTRFSHDITPIIL 192

  Fly   160 AAHKNNFEILRILLDRGAAVPVPHDIRCGCEECVRLTAEDSLRHSLSRVNIYRALCSPSLICLTS 224
            |:|.:.:||:.|||.:||.:..|||..|.|..|:.....||..||.||:|.|:.|.||:.:.|:|
Zfish   193 ASHCHEYEIVHILLRKGARIARPHDYFCKCNGCLYHQRHDSFSHSRSRINAYKGLASPAYLSLSS 257

  Fly   225 NDPIITAFQLSWELRNLALTEQECKSEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYDPQMSS- 288
            .||::||.:||.||..||..|:|.|::|..|..||:.|.|.|||..|.:.|:..|||.|.::.. 
Zfish   258 EDPVLTALELSNELAVLANIEKEFKNDYKTLSMQCKDFVVGLLDLCRNTEEVEAILNGDTEVGGH 322

  Fly   289 YEPGDRMSLTRLVQAISYKQKKFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPL 353
            ::.|||.:|.||..||.|:.||||||.|.||.|.||||:.|.|.|:::...|::.:..|.|..|:
Zfish   323 FDKGDRPNLVRLKLAIKYELKKFVAHPNCQQQLLSIWYENLSGLRQQTTAVKLLVVLGVVVGLPI 387

  Fly   354 YCLIYMCAPNCRTGQLMRKPFMKFLIHASSYLFFLFILILVSQRADDDFVRIFGTTRMKKELAE- 417
            ..|:|..||:.:.|:::|.||:||:.||:|:..||.:||:  ..||    |..||:.:...... 
Zfish   388 LALLYWIAPSSKLGKIIRGPFLKFVAHAASFTIFLGLLIM--NAAD----RFEGTSLLPNMTVHD 446

  Fly   418 --QELRQRGQTP-SKLELIVVMYVIGFVWEEVQEIFAVGMKSYLRNMWNFIDFLRNSLYVSVMCL 479
              .:|.:...|| :.:|::::.:|:|.:|.|.:||:::|.:.||...||.:||...:::|:....
Zfish   447 HPSQLFRMKTTPFTWMEMLIISWVVGMIWAECKEIWSLGPREYLLEPWNLLDFGMLAIFVTSFIA 511

  Fly   480 RAFAYIQ-------------QATEIARDPQMAY--IPREKWHDFDPQLIAEGLFAAANVFSALKL 529
            |..|:..             ..:.|....::.|  :.|..|...|||||:|||:|.|.|.|..::
Zfish   512 RFMAFYHANVAQNYVDKRYTDLSNITLPLEIEYYRLARVHWVPSDPQLISEGLYAIAVVLSFSRI 576

  Fly   530 VHLFSINPHLGPLQISLGRMVIDIVKFFFIYTLVLFAFACGLNQLLWYFAALEKSKCYVLPGGEA 594
            .::...|...|||||||||.|.||.||..|:.:|..||..|:..|..|:...:::..        
Zfish   577 AYILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYRGAKQNGA-------- 633

  Fly   595 DWGSHGDSCMKWRRFGNLFESSQSLFWASFGMVGLDDFELSGIKSYTRFWGLLMFGSYSVINVIV 659
                          |..:.||.::||||.||:..:....::....:....|.:::|.|:|..|||
Zfish   634 --------------FTTVEESFKTLFWAIFGLSEVKSVVINNGHKFIENIGYVLYGVYNVTMVIV 684

  Fly   660 LLNLLIAMMSNSYAMIDEHSDTEWKFARTKLWMSYFEDSATLPPPFNVLPSVKWVIRIFRKSSKT 724
            |||:||||::||:..|::.:|.||||||.|||.||||:..|||.|||::||.|.||.:..:..:.
Zfish   685 LLNMLIAMINNSFQEIEDDADVEWKFARAKLWFSYFEEGGTLPVPFNLIPSPKSVISLAMRLKRL 749

  Fly   725 I--------------------DRQRSKKRKEQEQFSEYDNIMRSLVWRYVAAMHRKFENNPVSED 769
            :                    .:|:....|.....|.|..||:.|:.|||.......|.:.|:|.
Zfish   750 LLIPLHRHKEDLKEDTELNESGKQKESSEKNSPHTSRYQRIMKRLIKRYVIKAQTDKEGDEVNEG 814

  Fly   770 DINEVKSEINTMRYEMLEIFENSGMDVSSANKKERQPRP-----RRIKVWERRLMKGFQV 824
            ::.|:|.:|:::|:|:||             :|.||...     ||:   |.||:..:::
Zfish   815 ELKEIKQDISSLRFELLE-------------EKSRQTEELAELVRRL---EERLISQYKI 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
trplNP_476895.1 TRPV 48..784 CDD:454755 275/787 (35%)
ANK repeat 78..114 CDD:293786 17/37 (46%)
ANK repeat 134..177 CDD:293786 15/42 (36%)
TRP_CaM_bind1 798..883 CDD:467881 8/32 (25%)
PHA03247 <961..1069 CDD:223021
trpc6bXP_002665445.3 None
Blue background indicates that the domain is not in the aligned region.

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