DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and Pnck

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_001186280.1 Gene:Pnck / 93843 MGIID:1347357 Length:343 Species:Mus musculus


Alignment Length:263 Identity:87/263 - (33%)
Similarity:141/263 - (53%) Gaps:4/263 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRN-VEREVEIMNSLQHHLII 92
            |....|::..::|.|.|..|...:::.:...:|.|.:|......|.. ||.|:.::..:.|..|:
Mouse    10 DISSVYEIREKLGSGAFSEVMLAQERGSAHLVALKCIPKKALRGKEALVENEIAVLRRISHPNIV 74

  Fly    93 QLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLK 157
            .|...:|....:.:.:||:.|||||||:: :....||:.....:.||..|::::|..||||.|||
Mouse    75 ALEDVHESPSHLYLAMELVTGGELFDRIM-ERGSYTEKDASHLVGQVLGAVSYLHSLGIVHRDLK 138

  Fly   158 PENILVLTQ-KGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTDMWSVGVIC 221
            |||:|..|. :.::|.:.||||: |......|....|||.:||||::.........|:|::|||.
Mouse   139 PENLLYATPFEDSKIMVSDFGLS-KIQAGNMLGTACGTPGYVAPELLEQKPYGKAVDVWALGVIS 202

  Fly   222 YVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKH 286
            |:|:.|..||..|:|.|..|.:..|.|:|:...::.||....|||..||.:|...|.|..:.::|
Mouse   203 YILLCGYPPFYDESDPELFSQILRASYEFDSPFWDDISESAKDFIRHLLERDPQKRFTCQQALQH 267

  Fly   287 KWL 289
            .|:
Mouse   268 LWI 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 85/256 (33%)
STKc_MLCK 40..289 CDD:271005 84/250 (34%)
PnckNP_001186280.1 STKc_CaMKI_beta 11..287 CDD:271071 86/262 (33%)
Calmodulin-binding. /evidence=ECO:0000250 290..311
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..343
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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