DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CAMK1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_005265573.1 Gene:CAMK1 / 8536 HGNCID:1459 Length:413 Species:Homo sapiens


Alignment Length:439 Identity:128/439 - (29%)
Similarity:196/439 - (44%) Gaps:67/439 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKR-NVEREVEIMNSLQHHLII 92
            |....||....:|.|.|..|....||.....:|.|.:.....|.|. ::|.|:.:::.::|..|:
Human    15 DIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV 79

  Fly    93 QLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLK 157
            .|...||....:.::::|:.|||||||:|:..| .|||.....|.||.:|:.::|..||||.|||
Human    80 ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF-YTERDASRLIFQVLDAVKYLHDLGIVHRDLK 143

  Fly   158 PENILVLT-QKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTDMWSVGVIC 221
            |||:|..: .:.::|.|.||||::..||...|....|||.:|||||:.....|...|.||:|||.
Human   144 PENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIA 208

  Fly   222 YVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKH 286
            |:|:.|..||..|||.:....:..|:|:|:...::.||....|||..|:.||...|.|..:.::|
Human   209 YILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQH 273

  Fly   287 KWLQQRPATAATATPITKAASAA-----SKSRLKSVSPVTA-----------PSESSEDST---- 331
            .|:   ....|....|.::.|..     :||:.|.....||           .|:..:..|    
Human   274 PWI---AGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQLGTSQEGQGQTASHG 335

  Fly   332 ETIEDEDDEEEVAVQQAKQKDQQQDEELANLCGDAELENKELDATKDNLKNFIVRWETHPNSPYV 396
            |.:......||.|:|:.....|:        |..|.:|..                   |..|.:
Human   336 ELLTPVAGGEERALQKGMGGPQR--------CTRAGVEGL-------------------PLRPPL 373

  Fly   397 F--DVEGNVIAPLSETSYPHPRRTHGADSLSSSRVCSPSPCDSISTLTD 443
            |  .::|..:|...||:           :.|.::.|.|. |.:.|...|
Human   374 FCLPMQGRQLAVAVETA-----------AWSRAQNCPPH-CPTSSRALD 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 94/256 (37%)
STKc_MLCK 40..289 CDD:271005 92/250 (37%)
CAMK1XP_005265573.1 STKc_CaMKI_alpha 16..278 CDD:271069 95/265 (36%)
S_TKc 20..276 CDD:214567 94/256 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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