DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CPK29

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_974150.2 Gene:CPK29 / 843936 AraportID:AT1G76040 Length:561 Species:Arabidopsis thaliana


Alignment Length:387 Identity:128/387 - (33%)
Similarity:191/387 - (49%) Gaps:54/387 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SEPEGVLEPAFPMRDVT---------INR-NVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLA 61
            |.|:...:||.|....|         :|| .:|....||:..|:|||:||..|||.||:||.:.|
plant    75 SNPQPKPKPAPPPPPSTSSGSQIGPILNRPMIDLSALYDLHKELGRGQFGITYKCTDKSNGREYA 139

  Fly    62 AKFV---PIPKREDKRNVEREVEIMNSLQHHL----IIQLYAAYEYQKMMCVVLELIEGGELFDR 119
            .|.:   .:.:|:|..:|.|||.|   |||..    |::...|||.:..:.:|:||..|||||||
plant   140 CKSISKRKLIRRKDIEDVRREVMI---LQHLTGQPNIVEFRGAYEDKDNLHLVMELCSGGELFDR 201

  Fly   120 VVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLKPEN-ILVLTQKGNRIKIIDFGLARKFD 183
            ::.......:....:| ||:...:...|..|:||.|||||| :||..::.:.||..||||:...:
plant   202 IIKKGSYSEKEAANIF-RQIVNVVHVCHFMGVVHRDLKPENFLLVSNEEDSPIKATDFGLSVFIE 265

  Fly   184 PDKRLRVLFGTPEFVAPEVVNFDCISYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIA 246
            ..|..|.:.|:..:|||||::   .:||  .|:||.||:.|:|:||:.||.||.:......:...
plant   266 EGKVYRDIVGSAYYVAPEVLH---RNYGKEIDVWSAGVMLYILLSGVPPFWGETEKTIFEAILEG 327

  Fly   247 KYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASK 311
            |.|.|...:..||....|.|.|:|.:|...|:||||.::|.|:..   |..:..||..|.....|
plant   328 KLDLETSPWPTISESAKDLIRKMLIRDPKKRITAAEALEHPWMTD---TKISDKPINSAVLVRMK 389

  Fly   312 -----SRLKSVSPVTAPSESSEDSTETIEDEDDEEEVAVQQAKQKDQQQDE-------ELAN 361
                 ::||.:            :.:.|.:...|||:...:...|:...||       ||.|
plant   390 QFRAMNKLKKL------------ALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRN 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 101/264 (38%)
STKc_MLCK 40..289 CDD:271005 98/258 (38%)
CPK29NP_974150.2 S_TKc 112..370 CDD:214567 101/264 (38%)
STKc_CAMK 112..369 CDD:270687 101/263 (38%)
PTZ00184 405..548 CDD:185504 10/35 (29%)
EFh 417..476 CDD:238008 6/23 (26%)
EFh 489..549 CDD:238008
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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