DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CPK30

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_177612.2 Gene:CPK30 / 843813 AraportID:AT1G74740 Length:541 Species:Arabidopsis thaliana


Alignment Length:432 Identity:134/432 - (31%)
Similarity:218/432 - (50%) Gaps:53/432 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EPEGVLEPAFPMRDVTINRNVDAHKHYDVLG-EVGRGKFGTVYKCRDKANGLQLAAKFVPIPKRE 71
            :|:|:...| |:|.:.::........| :|| |:|||:||..|.|.|:.....||.|  .|.||:
plant    34 DPDGLRTHA-PLRVIPMSHQSQISDKY-ILGRELGRGEFGITYLCTDRETREALACK--SISKRK 94

  Fly    72 -----DKRNVEREVEIMNSL-QHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTER 130
                 |..:|.|||.||::| :|..:::|.|.||..:.:.:|:||.||||||||:|.... .|||
plant    95 LRTAVDVEDVRREVTIMSTLPEHPNVVKLKATYEDNENVHLVMELCEGGELFDRIVARGH-YTER 158

  Fly   131 VCRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGN-RIKIIDFGLARKFDPDKRLRVLFGT 194
            ......|.:.|.:...|.||::|.||||||.|...:|.| .:|.|||||:..|.|.:|...:.|:
plant   159 AAATVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKENSALKAIDFGLSVLFKPGERFTEIVGS 223

  Fly   195 PEFVAPEVVNFDCISYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNG 257
            |.::||||:.   .:||  .|:||.|||.|:|:.|:.||..|.:......:.....||:.:.::.
plant   224 PYYMAPEVLK---RNYGPEVDVWSAGVILYILLCGVPPFWAETEQGVALAILRGVLDFKRDPWSQ 285

  Fly   258 ISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASKSRLKSVS---- 318
            ||......:.::|..|.:.|:||.:.:.|.|:|.  |..|...|:....    :||||..|    
plant   286 ISESAKSLVKQMLEPDSTKRLTAQQVLDHPWIQN--AKKAPNVPLGDIV----RSRLKQFSMMNR 344

  Fly   319 ------PVTAPSESSED-----STETIEDEDDEEEVAVQQ----AKQKDQQQDE-------ELAN 361
                  .|.|...|.::     :..|:.|:|::.:::..:    .::...|..|       |:|:
plant   345 LKKKALRVIAEHLSIQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVAD 409

  Fly   362 LCGDAELENKELDATKDNLKNFIVRWETHPNSPYV-FDVEGN 402
            :.|:..|:..|..|...:|:.  :..:.|....:: ||.:|:
plant   410 VNGNGCLDYGEFVAVIIHLQK--MENDEHFRQAFMFFDKDGS 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 100/264 (38%)
STKc_MLCK 40..289 CDD:271005 96/257 (37%)
CPK30NP_177612.2 STKc_CAMK 58..316 CDD:270687 100/264 (38%)
PTZ00184 353..497 CDD:185504 18/99 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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