DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqa and CDPK6

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_194096.1 Gene:CDPK6 / 828465 AraportID:AT4G23650 Length:529 Species:Arabidopsis thaliana


Alignment Length:419 Identity:132/419 - (31%)
Similarity:208/419 - (49%) Gaps:57/419 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PMRDVTINRNVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVP---IPKREDKRNVERE 79
            ||.:|        .:.|:...|:|||:||..|....|....|:|.|.:|   :..::|..:|.||
plant    70 PMEEV--------RRTYEFGRELGRGQFGVTYLVTHKETKQQVACKSIPTRRLVHKDDIEDVRRE 126

  Fly    80 VEIMNSLQ-HHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAM 143
            |:||:.|. |..|:.|..|||.:..:.:::||.||||||||:: .:.:.:||......||:...:
plant   127 VQIMHHLSGHRNIVDLKGAYEDRHSVNLIMELCEGGELFDRII-SKGLYSERAAADLCRQMVMVV 190

  Fly   144 AFIHGNGIVHLDLKPENILVLTQKGNR-IKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDC 207
            ...|..|::|.||||||.|.|::..|. :|..||||:..|.|..:.:.|.|:..:|||||:.   
plant   191 HSCHSMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDKFKDLVGSAYYVAPEVLK--- 252

  Fly   208 ISYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLL 270
            .:||  .|:||.|||.|:|:||:.||.|||:......:...:.||..:.:..:|....|.:.|:|
plant   253 RNYGPEADIWSAGVILYILLSGVPPFWGENETGIFDAILQGQLDFSADPWPALSDGAKDLVRKML 317

  Fly   271 AKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASK-----SRLKSVS-PVTAPSESSED 329
            ..|...|:||||.:.|.|:  |....|:..|:..|..:..|     ::||.:: .|.|.:.|.|:
plant   318 KYDPKDRLTAAEVLNHPWI--REDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEE 380

  Fly   330 STETIE-----DEDDEEEVAVQQAK-----------QKDQQQDEELANLCGDAELENKE-LDATK 377
            .....|     |.|:...|.:::.:           :.:.:|..|.|::.||..::..| :.||.
plant   381 IIGLKEMFKSLDTDNNGIVTLEELRTGLPKLGSKISEAEIRQLMEAADMDGDGSIDYLEFISATM 445

  Fly   378 DNLKNFIVRWETH----------PNSPYV 396
            .  .|.|.| |.|          .||.|:
plant   446 H--MNRIER-EDHLYTAFQFFDNDNSGYI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 97/261 (37%)
STKc_MLCK 40..289 CDD:271005 95/255 (37%)
CDPK6NP_194096.1 STKc_CAMK 78..335 CDD:270687 97/260 (37%)
PTZ00184 372..515 CDD:185504 23/103 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.