DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CAMKV

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_076951.2 Gene:CAMKV / 79012 HGNCID:28788 Length:501 Species:Homo sapiens


Alignment Length:643 Identity:159/643 - (24%)
Similarity:247/643 - (38%) Gaps:184/643 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PMRDVTI------NRNVDAHKHYDVLGEVGR-GKFGTVYKCRDKANG-LQLAAKFVPIPKREDKR 74
            |...||:      |:..:....|| ||:|.: .:|..:::.:||..| |....||.....|:.::
Human     2 PFGCVTLGDKKNYNQPSEVTDRYD-LGQVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRDGRKVRK 65

  Fly    75 NVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQV 139
            ..:.|:.|:..::|..|:||...:..:|...:.|||..|.|:||.::|..: .:||.....:|||
Human    66 AAKNEIGILKMVKHPNILQLVDVFVTRKEYFIFLELATGREVFDWILDQGY-YSERDTSNVVRQV 129

  Fly   140 CEAMAFIHGNGIVHLDLKPENILVLTQ-KGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVV 203
            .||:|::|...|||.:||.||::...: |.::|.|.||.||:.  .:..::...||||::|||||
Human   130 LEAVAYLHSLKIVHRNLKLENLVYYNRLKNSKIVISDFHLAKL--ENGLIKEPCGTPEYLAPEVV 192

  Fly   204 NFDCISYGTDMWSVGVICYVLISGLSPF---MGENDIET-----MSNVTIAKYDFEDECFNGISP 260
            .........|.|::|||.|:|:||..||   :.|:|.|.     ...:....|:|:...::.||.
Human   193 GRQRYGRPVDCWAIGVIMYILLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQ 257

  Fly   261 ECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAA-----SKSRLKSVSPV 320
            ...|.:.:|:..:...|:||.|.:.|:|:.   ..||:...|.....|.     ::::.|....|
Human   258 AAKDLVTRLMEVEQDQRITAEEAISHEWIS---GNAASDKNIKDGVCAQIEKNFARAKWKKAVRV 319

  Fly   321 T-------APSESSEDSTETIEDEDDEEEVAVQQAKQKDQQQDEELANLCGDAELENKELDATKD 378
            |       ||.:||..:.::....|.....|...|.............  |||...     |..|
Human   320 TTLMKRLRAPEQSSTAAAQSASATDTATPGAAGGATAAAASGATSAPE--GDAARA-----AKSD 377

  Fly   379 NLKNFIVRWETHPNSPYVFDVEGNVIAPLSETSYPHPRRTHGADSLSSSRVCSPSPCDSISTLTD 443
            |                        :||...::.|   .|.|:.:.::....:|:...||:..||
Human   378 N------------------------VAPADRSATP---ATDGSATPATDGSVTPATDGSITPATD 415

  Fly   444 DERGDIEDLPEEDESRSAENESPRSVATPINESREKLFPTVATSSPSTPTPQHLFNENFDEFSGS 508
               |.:  .|..|.|           |||..:.|    .|.||...:.||              :
Human   416 ---GSV--TPATDRS-----------ATPATDGR----ATPATEESTVPT--------------T 446

  Fly   509 QSTAQQQRSMKSYLHTFDRRNSDTTYLLGRRSSGERVNLADEIRKLSDHLLMLAEINTKLGDANN 573
            ||:|                                               |||   ||      
Human   447 QSSA-----------------------------------------------MLA---TK------ 455

  Fly   574 NGSSSGAPADPPAAAAAAAAPVPTSTAPASVAPSGST-----SSKTSE---ISQEGNR 623
                            |||.|.|....|.|.||.|:|     |||..|   .:||..|
Human   456 ----------------AAATPEPAMAQPDSTAPEGATGQAPPSSKGEEAAGYAQESQR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 85/265 (32%)
STKc_MLCK 40..289 CDD:271005 81/259 (31%)
CAMKVNP_076951.2 STKc_CaMK_like 22..286 CDD:270990 85/267 (32%)
S_TKc 24..286 CDD:214567 85/265 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..501 62/311 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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