DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and phkg2

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_012825992.1 Gene:phkg2 / 779740 XenbaseID:XB-GENE-994728 Length:395 Species:Xenopus tropicalis


Alignment Length:321 Identity:100/321 - (31%)
Similarity:161/321 - (50%) Gaps:39/321 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 HKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPI-PKR-------EDKRNVEREVEIMNSLQ 87
            ::.||....:|||...||.:|..:..|.|.|.|.:.: |:|       |.:.:..:|:||::.:.
 Frog    21 YQKYDPKEIIGRGVSSTVRRCIHRETGRQYAVKIIEVTPERLSPEQLKEVRLSTAKEMEILHHVS 85

  Fly    88 HH-LIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGI 151
            :| .||.|..:||....:.:|.:|::.||||| .:.::..|:|:..|..:|.:.||:.::|.|.|
 Frog    86 NHPSIISLIDSYESSTFIFLVFDLMKRGELFD-YLTEKVTLSEKETRCIMRSLLEAVTYLHSNNI 149

  Fly   152 VHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCI------SY 210
            ||.||||||||:  .....||:.|||.:....|.::||.|.|||.::|||::.  |.      .|
 Frog   150 VHRDLKPENILM--DDCLNIKLSDFGFSCILKPTEKLRELCGTPGYLAPEILK--CSMDETHPGY 210

  Fly   211 G--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKD 273
            |  .|:|:.|||.:.|::|..||.....:..:..:...::.|....::..|....|.|.:||...
 Frog   211 GREVDLWACGVIMFTLLAGSPPFWHRKQMLMLRMIMDGRFQFGSPEWDDRSSTVKDLICRLLEVC 275

  Fly   274 LSTRMTAAECMKHKWLQ--QRPATAATATPITK------AASAASKS-----RLKSVSPVT 321
            ...|:||.:.::|.:.|  ||...    ||:..      ||.||...     |.:...|||
 Frog   276 PEKRLTAEQALQHPFFQSHQRDQD----TPVKPSYRFRIAAWAALACVRILVRWRRARPVT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 87/271 (32%)
STKc_MLCK 40..289 CDD:271005 85/265 (32%)
phkg2XP_012825992.1 STKc_PhKG2 13..291 CDD:271083 87/274 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4277
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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