DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and phkg1a

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_001071080.1 Gene:phkg1a / 565379 ZFINID:ZDB-GENE-061103-385 Length:394 Species:Danio rerio


Alignment Length:282 Identity:89/282 - (31%)
Similarity:138/282 - (48%) Gaps:25/282 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMNSLQHHL--- 90
            |.::.||....:|||....|.:|..|....:.|.|.:.|.. .||.|.|...||.|:....:   
Zfish    15 DFYQKYDPKEILGRGVSSVVRRCIHKRTTQEYAVKVIDITP-SDKMNTEEIEEIRNATIKEIDIL 78

  Fly    91 --------IIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIH 147
                    ||||...:|.:....:|.:|::.||||| .:.::..|:|:..|..:|.:.|.:.|:|
Zfish    79 KKVCGQENIIQLKDCFETKAFFFLVFDLMKKGELFD-YLTEKVTLSEKETRKIMRSLLEVVQFLH 142

  Fly   148 GNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCI---- 208
            ...|||.||||||||:  .....||:.|||.|.:..|.::|..:.|||.::|||::  :|.    
Zfish   143 SQNIVHRDLKPENILL--DDNMNIKLTDFGFAVQIAPGQKLNEVCGTPGYLAPEII--ECSMDPH 203

  Fly   209 --SYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKL 269
              .||  .|:||.|||.:.|::|..||.....:..:..:....|.|....::..|....|.|:|:
Zfish   204 HQGYGAAVDLWSAGVIMFTLLAGSPPFWHRKQMLMLRMILAGNYQFTSPEWDDRSDTVKDLISKM 268

  Fly   270 LAKDLSTRMTAAECMKHKWLQQ 291
            |..:...|.||.:.:.|.:.||
Zfish   269 LVVNPEKRFTATDALNHPFFQQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 86/273 (32%)
STKc_MLCK 40..289 CDD:271005 84/267 (31%)
phkg1aNP_001071080.1 STKc_PhKG1 16..291 CDD:271084 88/281 (31%)
S_TKc 20..288 CDD:214567 86/273 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4277
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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