DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and dapk3

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_012818642.1 Gene:dapk3 / 549766 XenbaseID:XB-GENE-969752 Length:463 Species:Xenopus tropicalis


Alignment Length:377 Identity:137/377 - (36%)
Similarity:211/377 - (55%) Gaps:38/377 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RNVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKRE--------DKRNVEREVEI 82
            :|||  ..|::..|:|.|:|..|.|||:::.|::.||||  |.||.        .:..:||||:|
 Frog     7 QNVD--DFYEMGEELGSGQFAIVRKCRERSTGVEYAAKF--IKKRRLSSSRRGVSREEIEREVDI 67

  Fly    83 MNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIH 147
            :..:||..||.|:..:|.:..:.::|||:.||||||.:...| .|:|....:|::|:.:.:.::|
 Frog    68 LREIQHPNIITLHDVFENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATMFLKQILDGVHYLH 131

  Fly   148 GNGIVHLDLKPENILVL--TQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISY 210
            ...|.|.|||||||::|  :....|||:||||:|.|.:.....:.:||||||||||:||::.:..
 Frog   132 HKNIAHFDLKPENIMLLDHSSPSPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGL 196

  Fly   211 GTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLS 275
            ..||||:|||.|:|:||.|||:|:...||::|::...|||::|.|:..|....|||.:||.||..
 Frog   197 EADMWSIGVITYILLSGASPFLGDTKQETLTNISGVNYDFDEEYFSNTSELAKDFIRRLLVKDPK 261

  Fly   276 TRMTAAECMKHKWLQQRPATAATATPITK--------AASAASKSRLKS--VSPVTAPSESSEDS 330
            .|||..:.::|.|::.|..:|...|...|        :.....:.|||:  :...|..|.||...
 Frog   262 KRMTIDQSLEHSWIKVRGPSALHTTKAIKRRNVRHEDSGKRPERRRLKTTRLKEYTIKSHSSMPP 326

  Fly   331 TET---------IEDEDDEEEVAVQQAKQKDQQQDEELANLCGDAEL-ENKE 372
            ..|         :.:|....|.|:::. ||.|....|  :||....: |.||
 Frog   327 NNTYVNFERFSHVLEELGAAEDALREL-QKSQATSRE--DLCALRSIYEEKE 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 109/264 (41%)
STKc_MLCK 40..289 CDD:271005 107/258 (41%)
dapk3XP_012818642.1 STKc_DAPK3 7..277 CDD:271097 113/274 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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