DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CaMKI

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster


Alignment Length:381 Identity:105/381 - (27%)
Similarity:174/381 - (45%) Gaps:53/381 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 INRNVDAHKHYDVLGEVGRGKFGTVYKCRDK-ANGLQLAAKFVPIPKREDKR-------NVEREV 80
            :|:.|...:.|::.|.:|.|.|..|.....| :.|...|.|.:      ||:       ::|.|:
  Fly    21 LNKQVSIEEKYNLHGLLGTGAFSEVRLAESKDSPGEHFAVKII------DKKALKGKEESLENEI 79

  Fly    81 EIM---------------NSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTER 130
            .::               ..|.|..|:||...||.:..:.:|:||:.|||||||:| ::...||:
  Fly    80 RVLRRFSANHFDGKCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFDRIV-EKGSYTEK 143

  Fly   131 VCRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLT-QKGNRIKIIDFGLARKFDPDKRLRVLFGT 194
            .....|||:.||:.::|..|:||.||||||:|..: ...::|.|.||||: |.:....:....||
  Fly   144 DASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLS-KMEDSGIMATACGT 207

  Fly   195 PEFVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGIS 259
            |.:|||||:.........|:||:|||.|:|:.|..||..|||....:.:....::|:...::.||
  Fly   208 PGYVAPEVLAQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKGDFEFDSPYWDEIS 272

  Fly   260 PECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAAT--ATPITKAASAASKSRLKSV----- 317
            .....||..|:...:..|.|..:.:.|.|:....|::..  .|...:.....:|||.|..     
  Fly   273 ESAKHFIKNLMCVTVEKRYTCKQALGHAWISGNEASSRNIHGTVSEQLKKNFAKSRWKQAYYAAT 337

  Fly   318 -------SPVTAPSESSEDSTETIEDEDDEEEVA-------VQQAKQKDQQQDEEL 359
                   ..:.:.|.::.||:.:...:......|       |..::|..|...:|:
  Fly   338 VIRQMQRMALNSNSNANFDSSNSSNQDSTTPTAATGAWTSNVLSSQQSVQSHAQEM 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 88/278 (32%)
STKc_MLCK 40..289 CDD:271005 86/272 (32%)
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 88/281 (31%)
S_TKc 31..302 CDD:214567 88/278 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24347
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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