DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and phkg2

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_957256.1 Gene:phkg2 / 393937 ZFINID:ZDB-GENE-040426-825 Length:390 Species:Danio rerio


Alignment Length:335 Identity:97/335 - (28%)
Similarity:163/335 - (48%) Gaps:38/335 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RDVTINRNV-------DAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPK-------- 69
            ||:.:...:       :.::.||....:|||....|.:|..|..|.:.|.|.:.|..        
Zfish     3 RDIVLGDELPDWVGAKEFYQKYDPKEVIGRGVSSVVRRCVHKHTGQEFAVKIIEITAEKMTEQQL 67

  Fly    70 REDKRNVEREVEIMNSLQ-HHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCR 133
            .|.|.:..:|:.::|.:: |..||.|..:||....:.:|.:|:..||||| .:.::..|:|:..|
Zfish    68 EEVKSSTLKEIHVLNLVKGHPSIITLIDSYESTAFIFLVFDLMRRGELFD-YLTEKVTLSEKETR 131

  Fly   134 VFIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFV 198
            ..:|.:.||:.::|...|||.|||||||| |..:|: :|:.|||.:.:..||::||.|.|||.::
Zfish   132 SMMRALLEAVQYLHALNIVHRDLKPENIL-LDDQGH-LKLSDFGFSVQLGPDEKLRELCGTPGYL 194

  Fly   199 APEVVNFDCI------SYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECF 255
            |||::.  |.      .||  .|:|:.|||.:.|::|..||.....:..:..:...:|.|....:
Zfish   195 APEILK--CSMDETHEGYGKEVDLWACGVILFTLLAGSPPFWHRKQLLMLRMIMEGRYQFSSPEW 257

  Fly   256 NGISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQ---------RPATAATATPITKAASAASK 311
            :..|....|.|::||..:.:.|:||.:.:.|.:..|         .|.....|..:|..|....:
Zfish   258 DDRSDTVKDLISRLLVVEPTIRLTAEQALAHPFFCQYQKEDVRLFSPRKTFKALILTVLACIRMQ 322

  Fly   312 SRLKSVSPVT 321
            .|.....|:|
Zfish   323 CRYYRARPLT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 87/271 (32%)
STKc_MLCK 40..289 CDD:271005 85/265 (32%)
phkg2NP_957256.1 STKc_PhKG2 13..291 CDD:271083 87/282 (31%)
Pkinase 24..291 CDD:278497 87/271 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4277
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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