DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and camkvb

DIOPT Version :10

Sequence 1:NP_724821.2 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_956744.1 Gene:camkvb / 393422 ZFINID:ZDB-GENE-040426-1140 Length:436 Species:Danio rerio


Alignment Length:390 Identity:110/390 - (28%)
Similarity:183/390 - (46%) Gaps:71/390 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PEGVLEPAFPMRDVTINRNVDAHKHYDVLGEVGRG-KFGTVYKCRDKANGLQL--AAKFVPIPKR 70
            |.|.|:|. ..:|  .|...:....|| ||::.:. :|..:::.:|| |.|::  ..||:....|
Zfish     2 PFGCLKPG-EKKD--YNSPTEITDKYD-LGQIVKSEEFCEIFRAKDK-NTLKMYTCKKFLKKDGR 61

  Fly    71 EDKRNVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVF 135
            :.::..:.|:.|:..::|..|:||...||.:|...:.|||..|.|:||.::|..: .:||.....
Zfish    62 KVRKAAKNEIVILKMVKHPNILQLVDVYETRKEYYLFLELATGREVFDWILDQGY-YSERDTSNV 125

  Fly   136 IRQVCEAMAFIHGNGIVHLDLKPENILVLTQ-KGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVA 199
            ||||.||:|::|...|||.:||.||::...: |.::|.|.||.||:.  .:..::...||||::|
Zfish   126 IRQVMEAVAYLHSLKIVHRNLKLENLVYYNRLKHSKIVISDFHLAKL--ENGLIKEPCGTPEYLA 188

  Fly   200 PEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSN--------VTIAKYDFEDECFN 256
            ||||.........|.|::|||.|:|:||..||..|.|.:...|        :....|:|:...::
Zfish   189 PEVVGRQRYGRPVDCWALGVIMYILLSGNPPFYDEADDDDYENHDKNLFRKILAGDYEFDSPYWD 253

  Fly   257 GISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPA--------------------------- 294
            .||....:.:::|:..|...|:||.|.:.|:|:....|                           
Zfish   254 EISDSAKNLVSRLMEVDQDQRLTAQEAINHEWISGNAASDKNIKENVCAQIEKNFAKAKWKKAVR 318

  Fly   295 --------------TAATATPITKAASA----------ASKSRLKSVSPVTAPSESSEDSTETIE 335
                          |||...|..:||:|          |.::...:....||||.::|..:.:||
Zfish   319 VTTMMKRLRAPENQTAAATAPAAEAAAASPSEADPAAGAQETPQAASEASTAPSSTAESLSASIE 383

  Fly   336  335
            Zfish   384  383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_724821.2 STKc_MLCK 40..289 CDD:271005 83/260 (32%)
camkvbNP_956744.1 STKc_CaMK_like 22..286 CDD:270990 87/268 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..436 15/56 (27%)
PRK07003 <354..>429 CDD:235906 8/30 (27%)

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