DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and mek1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_594908.1 Gene:mek1 / 2541604 PomBaseID:SPAC14C4.03 Length:445 Species:Schizosaccharomyces pombe


Alignment Length:305 Identity:92/305 - (30%)
Similarity:139/305 - (45%) Gaps:33/305 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 HYDVLGE--------VGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVE-REVEIMNSLQH 88
            |::..||        :|.|.|..:|...|...|.|.|.|.:...|...||..| .|:.|:..|.|
pombe   151 HHEYAGERFNITQRLLGIGGFSRIYMAMDNNTGGQYACKIIDKKKISTKRFFEDHEMTILRKLDH 215

  Fly    89 HLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIR-QVCEAMAFIHGNGIV 152
            ..||::...|..:....:..|::.||:||..:.  :......|..:||. |:.:.:.::|...|:
pombe   216 PNIIKVNMEYNSETQFFIFEEMVTGGDLFSYLT--KLGTVPEVTTLFIMFQILQGLKYLHEQNII 278

  Fly   153 HLDLKPENILVLTQKGN--RIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNF---------D 206
            |.|||.||||:.:....  ||.:.|||:||.....|||....||||:.|||:...         :
pombe   279 HRDLKLENILIASSSDTIFRIILTDFGVARCMQKGKRLSTFVGTPEYTAPEIQRLKGRSQVEKEN 343

  Fly   207 CISYG--TDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKL 269
            ...||  .|:||:|||.::|:||.||...:       .|...:.||.|..:..:|.:..|.|:.|
pombe   344 SSGYGKEVDLWSLGVIMFLLLSGNSPSFAD-------GVKEKQVDFRDPVWKSVSRQAKDLISNL 401

  Fly   270 LAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASKSRL 314
            |..:...|.|..:|:.|.|. .|.::..|....|:.......|||
pombe   402 LKTNPPDRFTVKQCLSHPWF-ARHSSRLTKLYETRILKPLKHSRL 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 84/277 (30%)
STKc_MLCK 40..289 CDD:271005 82/263 (31%)
mek1NP_594908.1 FHA 39..141 CDD:238017
STKc_CAMK 163..420 CDD:270687 82/265 (31%)
S_TKc 164..421 CDD:214567 82/265 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4277
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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