DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and Camkv

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_663596.1 Gene:Camkv / 235604 MGIID:2384296 Length:512 Species:Mus musculus


Alignment Length:651 Identity:155/651 - (23%)
Similarity:240/651 - (36%) Gaps:189/651 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PMRDVTI------NRNVDAHKHYDVLGEVGR-GKFGTVYKCRDKANG-LQLAAKFVPIPKREDKR 74
            |...||:      |:..:....|| ||:|.: .:|..:::.:||..| |....||.....|:.::
Mouse     2 PFGCVTLGDKKNYNQPSEVTDRYD-LGQVIKTEEFCEIFRAKDKTTGKLHTCKKFQKRDGRKVRK 65

  Fly    75 NVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQV 139
            ..:.|:.|:..::|..|:||...:..:|...:.|||..|.|:||.::|..: .:||.....:|||
Mouse    66 AAKNEIGILKMVKHPNILQLVDVFVTRKEYFIFLELATGREVFDWILDQGY-YSERDTSNVVRQV 129

  Fly   140 CEAMAFIHGNGIVHLDLKPENILVLTQ-KGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVV 203
            .||:|::|...|||.:||.||::...: |.::|.|.||.||:.  .:..::...||||::|||||
Mouse   130 LEAVAYLHSLKIVHRNLKLENLVYYNRLKNSKIVISDFHLAKL--ENGLIKEPCGTPEYLAPEVV 192

  Fly   204 NFDCISYGTDMWSVGVICYVLISGLSPF---MGENDIET-----MSNVTIAKYDFEDECFNGISP 260
            .........|.|::|||.|:|:||..||   :.|:|.|.     ...:....|:|:...::.||.
Mouse   193 GRQRYGRPVDCWAIGVIMYILLSGNPPFYEEVEEDDYENHDKNLFRKILAGDYEFDSPYWDDISQ 257

  Fly   261 ECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAA-----SKSRLKSVSPV 320
            ...|.:.:|:..:...|:||.|.:.|:|:.   ..||:...|.....|.     ::::.|....|
Mouse   258 AAKDLVTRLMEVEQDQRITAEEAISHEWIS---GNAASDKNIKDGVCAQIEKNFARAKWKKAVRV 319

  Fly   321 T-------APSESSEDSTETIEDEDDEEEVAVQQAKQKDQQQDEELANLCGDAELENKELDATKD 378
            |       ||.:|...:|::..|      .|...|...........|...|.|........|.  
Mouse   320 TTLMKRLRAPEQSGTAATQSASD------AATPGAAGGAIAAAAAAAAAGGAASASGASATAA-- 376

  Fly   379 NLKNFIVRWETHPNSPYVFDVEGNV--------IAPLSETSYPHPRRTHGADSLSSSRVCSPSPC 435
                                .||..        ||....::.|   .|.|:.:.::....:|:..
Mouse   377 --------------------TEGGAGCAAKSDDIASADRSATP---ATDGSATPATDGSVTPATD 418

  Fly   436 DSISTLTDDERGDIEDLPEEDESRSAENESPRSVATPINESREKLFPTVATSSPSTPTPQHLFNE 500
            .||:..||   |.:  .|..|.|           |||..:.|    .|.||...:.|..|     
Mouse   419 GSITPATD---GSV--TPATDRS-----------ATPATDGR----ATPATEESTVPATQ----- 458

  Fly   501 NFDEFSGSQSTAQQQRSMKSYLHTFDRRNSDTTYLLGRRSSGERVNLADEIRKLSDHLLMLAEIN 565
                                                                             
Mouse   459 ----------------------------------------------------------------- 458

  Fly   566 TKLGDANNNGSSSGAPADPPAAAAAAAAPVPTSTAPASVAPSGST-----SSKTSE---ISQEGN 622
                       ||..|     ||.|||.|.|....|.|.|..|:|     |||..|   .:||..
Mouse   459 -----------SSALP-----AAKAAATPEPAVAQPDSTALEGATGQAPPSSKGEEATGCAQESQ 507

  Fly   623 R 623
            |
Mouse   508 R 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 85/265 (32%)
STKc_MLCK 40..289 CDD:271005 81/259 (31%)
CamkvNP_663596.1 STKc_CaMK_like 22..286 CDD:270990 85/267 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..347 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 393..512 43/225 (19%)
DUF5585 397..>511 CDD:375359 43/221 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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