DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqa and mlck-1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_509689.1 Gene:mlck-1 / 181217 WormBaseID:WBGene00013869 Length:1211 Species:Caenorhabditis elegans


Alignment Length:1095 Identity:269/1095 - (24%)
Similarity:443/1095 - (40%) Gaps:282/1095 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 IYIDDSEPEGVLEPAFPMRDVTINRNVDAHKHYDVLGEV----GRGKFGTVYKCRDKANGLQLAA 62
            |.:|:..|..:.||  |:.||....|:.|:..:|.|.:|    |.||||.||...:|..|.:.||
 Worm    11 IKVDEHYPSELDEP--PVFDVKKIENIRANVKFDTLYQVTKLLGDGKFGKVYCVIEKETGKEFAA 73

  Fly    63 KFVPIPKREDKRNVEREVEIMNSLQHHLIIQLY-AAYEYQKMMCVVLELIEGGELFDRVVDDEFV 126
            ||:.|.|..|:..|||||.|:..|:|..|.|:| |.|.....:.:::|::.||||||||.::.:|
 Worm    74 KFIKIRKEADRAEVEREVSILTQLRHPRIAQIYDAFYTTTNDVVLIMEIVRGGELFDRVAEESYV 138

  Fly   127 LTERVCRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVL 191
            |:|....:.|.|:|||:.:||...|:|||:|||||:.::..|||||:|||||||.:|..:.|:.:
 Worm   139 LSELAVVMIICQLCEAIDYIHKQNILHLDVKPENIMCVSLTGNRIKLIDFGLARHYDGTQELKYM 203

  Fly   192 FGTPEFVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFN 256
            .|||||.||||:.|:.:.|.|||||:|||.|:|:||.|||:|:|..||..||....::|.:| |:
 Worm   204 AGTPEFAAPEVIKFEKLDYHTDMWSIGVITYILLSGYSPFLGDNLGETYCNVEKGVWEFTEE-FD 267

  Fly   257 GISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAAS----------- 310
            .::.|..||:.|||..|.|.||...||::|.|:.:....||..|.:.|..:|.:           
 Worm   268 TVTEEAKDFVTKLLVYDQSKRMLPHECLQHPWIAKHRQKAACNTILEKPLNAPTLDNKQIMRYNA 332

  Fly   311 ------------------------KSRL-----KSVSPVTAPSESSEDSTE-------------- 332
                                    |:|:     |...|:...:|..|....              
 Worm   333 RRKFRRMIIYVKFLIEMNRLRNSLKTRMSANGHKFFDPLLKMAEKKEQKISNAIGTAGCPASGLG 397

  Fly   333 -----TIEDEDDEEEVAVQQ-------AKQKDQQQDEELANLCGDAELE------NKELDATKDN 379
                 .::.:....:|.|.|       .:::::::.:::||..|..:.|      .|:|..|..:
 Worm   398 SLVKMAVDSQKKNGDVPVTQDANMSTEPEKEEKKKKKKIANADGSTKTEKTSSVKKKKLVETDGD 462

  Fly   380 ---------------------------LKNFIVRWETHPNSPYVFDVEGNVIAPLSETSYPHPRR 417
                                       |||..|  ..:.|||    ...::.:...|...|..::
 Worm   463 AGLRPPPELMTKRASTGGESLLAAVKVLKNLEV--VENGNSP----KRKSLCSVKEEKEIPAKKQ 521

  Fly   418 THGADSLSSSRVCSPSPCDSISTLTDDERGDI--EDLPEEDESRSAENES---PRSVAT-PINES 476
            |.|                 ..||...|.|||  :..|.:.::.:.::.|   |:.:.| |..|.
 Worm   522 TEG-----------------YKTLETTENGDIRRKSAPVKQDTLTCQDNSKVTPQLLETAPNGEI 569

  Fly   477 REKLFPTVATSSPSTPTPQHLFNE-------------------------NFDEFSGSQSTAQQQR 516
            |.|   :.:.....:..|:.:..:                         :.|| .|.:...::::
 Worm   570 RRK---SASAKEEKSVKPEEVIRKKSSASVKETKTVELSVVPVKLEKLASIDE-KGEKLVKKKKK 630

  Fly   517 SM---------KSYLHTFDRRNSDTTYLLG----------RRSSGERVNLADEIRKLSDHLLMLA 562
            :.         ||.:.:.:.:..:...||.          |||.|.:  .|.|.:.:....|.:.
 Worm   631 TTTVTAEIEKPKSVIESKEEKLVEKPKLLNGTLVSDALEKRRSLGSK--RASETQDVGLRPLPVV 693

  Fly   563 EINTK--LGDANNNGSSSGAPADPPAAAAAAAAPVPTSTAPASVAPSGSTSSKTSEISQEGNRWT 625
            :.:.|  |.|......|...||:|      ....||.:..||.   .|:...:...:....|...
 Worm   694 DFSPKIVLTDKKEPKESKTKPAEP------LKEIVPETKKPAR---QGALRKRDKSLDDILNAAP 749

  Fly   626 SKTTSSSSWNRPTLKGGLFSQASSSSQ---SQSTYDDGKGKTKISSLSVRLQQSIEE----TPKL 683
            |.||.|.| ...::|..:......|.:   |:......|...|..|:..||...|.|    .|||
 Worm   750 SPTTLSKS-TVTSVKHSVVETIHPSGEIIKSEKVLTKKKSLKKDKSIDDRLPVKIIEDKASLPKL 813

  Fly   684 --------SNGNSSSSK---------SLVQSQRKSTVQTMSSSNARSFTNQ---QVQRTSTTSSK 728
                    |.....:||         :|::.::|.|...|:|....:.|.|   .|:||:.:|.|
 Worm   814 KTDVVTFESKPVKKTSKIVKLIPEDANLIKDEKKPTKIVMTSEKQATTTVQTTTSVKRTTKSSEK 878

  Fly   729 VIS--------SSTRSSNTSSSNYIASNASNSISTSASNPSS--TGASNPI------TTSASNES 777
            .:.        .|::..|:...:...|..:......::.|:.  |...|.:      :||.....
 Worm   879 KVEHTADGKSVESSQKKNSQKDDVKVSQVTTKKEEDSTQPAPTLTVKKNVVKQTAEKSTSEKEHK 943

  Fly   778 ASSRRAKFRINQMS---RDVPVGLPDTHQTVNLEEAANTTKDCLLHLLEKYNETRIRNPVGRHQS 839
            .:..:.:.||.:.|   :|..|......|::.:..             ||:.|:::   :|..  
 Worm   944 TTENKEQERIIKKSSTLKDKDVAQVSLQQSIKVNG-------------EKHKESKV---IGTK-- 990

  Fly   840 ISVDWRVSDNLEYRSMSSINAFFQRHNPNGG----------GHNVRHIQAQLEEK 884
                 .|.:.||.:...:|||     ||...          |...:|::...:.|
 Worm   991 -----TVINKLELKGEETINA-----NPKKSSLKKATAKVTGETTKHLEISTDGK 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 122/259 (47%)
STKc_MLCK 40..289 CDD:271005 120/253 (47%)
mlck-1NP_509689.1 PKc_like 51..300 CDD:389743 119/249 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000818
OrthoInspector 1 1.000 - - oto19694
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24347
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4277
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.940

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