DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and R06A10.4

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_001380035.1 Gene:R06A10.4 / 171688 WormBaseID:WBGene00019911 Length:391 Species:Caenorhabditis elegans


Alignment Length:318 Identity:94/318 - (29%)
Similarity:162/318 - (50%) Gaps:13/318 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMNSLQHHLIIQLYAAY 98
            |:||..||:|.|..|.:.:.:......|.|.|    ..|...|..|:.|::.|.|..:|:|...:
 Worm    71 YEVLAVVGKGSFSQVLRVQHRVTRKYFAVKVV----NGDCGAVNNELNILSRLSHPFVIRLEEVF 131

  Fly    99 EYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLKPENILV 163
            :....:.:|:::..|||::|||| .:...:|...|..::.:...:.::|...:.|.||||||:|.
 Worm   132 KSSSKLFIVMQMASGGEMYDRVV-AKGRYSEEEARNALKMLLTGLTYLHSIRVTHRDLKPENLLY 195

  Fly   164 LTQKGN-RIKIIDFGLA-RKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTDMWSVGVICYVLIS 226
            ...:.. |:.|.||||| :...|::.:....||||::|||::.....:...|||:||||.|:|:|
 Worm   196 ADSRPEARLLITDFGLAYQATKPNETMTETCGTPEYIAPELLLRVPYTQKVDMWAVGVIAYILMS 260

  Fly   227 GLSPFMGENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQ- 290
            |:.||..:......:::..|.|.:..:.::| |.....|:..||..:...|::::..|||:||. 
 Worm   261 GIMPFDDDCRSRLYTHIITANYVYYPQFWSG-SELAKQFVDSLLETNSVERLSSSAAMKHEWLTG 324

  Fly   291 QRPATAATATPITKAASAASKSRLKSVSPVTAPSESSE----DSTETIEDEDDEEEVA 344
            :||:|..:..|....:...|..|.||...:.:.:.|..    |..|..|..:|.:.||
 Worm   325 ERPSTTQSRPPTRPTSEYNSMQRTKSTRSIRSVTRSDHGHRVDPREVDELANDLKRVA 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 77/256 (30%)
STKc_MLCK 40..289 CDD:271005 74/250 (30%)
R06A10.4NP_001380035.1 STKc_PSKH1 69..322 CDD:270989 77/256 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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