DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and Uhmk1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_034763.3 Gene:Uhmk1 / 16589 MGIID:1341908 Length:419 Species:Mus musculus


Alignment Length:417 Identity:100/417 - (23%)
Similarity:165/417 - (39%) Gaps:85/417 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 YDVLGEVGRGKFGTVYK---CRDKANGLQLAAKFVP-----IPKREDKRNVEREVEIMNSLQ-HH 89
            :.|...:|.|...:||:   |....:......:|:|     ......:....:|...:..|| |.
Mouse    23 WQVQSRLGSGSSASVYRVRCCGTPGSPPGALKQFLPPGTTGAAASAAEYGFRKERAALEQLQGHR 87

  Fly    90 LIIQLYAAYEYQ-----KMMCVVLELIEGGELFDRVVDDEFVL--TERVCRVFI-----RQVCEA 142
            .|:.||..:...     ...|::|||::       |...|.:|  :.:.|.:::     |.|.||
Mouse    88 NIVTLYGVFTIHFSPNVPSRCLLLELLD-------VSVSELLLYSSHQGCSMWMIQHCARDVLEA 145

  Fly   143 MAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDC 207
            :||:|..|.||.||||.||| .:.:....|:|||||:.| :.::.::.: .|..:.|||....:|
Mouse   146 LAFLHHEGYVHADLKPRNIL-WSAENECFKLIDFGLSFK-EGNQDVKYI-QTDGYRAPEAELQNC 207

  Fly   208 ISY-----------GTDMWSVGVICYVLISG--LSPFMGENDIETMSNVTIAKYDFEDECFNGIS 259
            ::.           ..|:||:|:|...:.||  |...:...:.:..|:..|..........|...
Mouse   208 LAQAGLQSDTECTSAVDLWSLGIILLEMFSGMKLKHTVRSQEWKANSSAIIDHIFASKAVVNAAI 272

  Fly   260 P--ECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASKSRLKSV-SPVT 321
            |  ...|.|..:|..|...|:              ||..|..:|......|.....|..: :||.
Mouse   273 PAYHLRDLIKSMLHDDPGRRI--------------PAEMALCSPFFSIPFAPHIEDLVMLPTPVL 323

  Fly   322 APSESSEDSTETIEDEDDEEEVAVQQAKQKDQ------------------QQDEELANLCGDAEL 368
            ......:|  :.:|:||:.|:| |:..|::.|                  |...|.|| .||::.
Mouse   324 RLLNVLDD--DYLENEDEYEDV-VEDVKEECQKYGPVVSLLVPKENPGRGQVFVEYAN-AGDSKA 384

  Fly   369 ENKELDATKDNLKNFIVRWETHPNSPY 395
            ..|.|.....:.| |:|. ..:|.|.|
Mouse   385 AQKLLTGRMFDGK-FVVA-TFYPLSAY 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 69/290 (24%)
STKc_MLCK 40..289 CDD:271005 68/284 (24%)
Uhmk1NP_034763.3 STKc_KIS 22..308 CDD:270922 73/308 (24%)
RRM_UHMK1 318..405 CDD:240911 22/92 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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