DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and CAPSL

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_006714507.1 Gene:CAPSL / 133690 HGNCID:28375 Length:225 Species:Homo sapiens


Alignment Length:130 Identity:30/130 - (23%)
Similarity:41/130 - (31%) Gaps:44/130 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 GEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMNSLQHHLIIQLYAAYEYQK 102
            |..|....|.|::..|..|...|..|                 |.|..|..:             
Human    54 GSAGIKGLGRVFRIMDDDNNRTLDFK-----------------EFMKGLNDY------------- 88

  Fly   103 MMCVVLELIEGGELFDRVVDD--------EFVLTERVCRVFIRQVCEAMAFIH----GNGIVHLD 155
              .||:|..|..|||.|...|        ||:||.|......|:.....||..    |:|::.::
Human    89 --AVVMEKEEVEELFRRFDKDGNGTIDFNEFLLTLRPPMSRARKEVIMQAFRKLDKTGDGVITIE 151

  Fly   156  155
            Human   152  151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 30/130 (23%)
STKc_MLCK 40..289 CDD:271005 29/128 (23%)
CAPSLXP_006714507.1 EF-hand_7 61..118 CDD:290234 19/88 (22%)
EFh 63..118 CDD:238008 18/86 (21%)
EF-hand_7 100..157 CDD:290234 14/52 (27%)
EFh 101..155 CDD:238008 13/51 (25%)
EF-hand_7 133..202 CDD:290234 4/19 (21%)
EFh 133..199 CDD:298682 4/19 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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