DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and Mylk2

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:NP_476557.2 Gene:Mylk2 / 117558 RGDID:620934 Length:610 Species:Rattus norvegicus


Alignment Length:315 Identity:143/315 - (45%)
Similarity:209/315 - (66%) Gaps:17/315 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IDDSEPEGVLEPA-FPMRDVTINR-NVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVP 66
            :||..|    .|| ||.|.|.:.. ||::....:....:|.||||.|..|.:::.||:||||.:.
  Rat   271 LDDCPP----PPAPFPHRIVELRTGNVNSEFSMNSKEALGGGKFGAVCTCTERSTGLKLAAKVIK 331

  Fly    67 IPKREDKRNVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERV 131
            ....:||..|..|:|:||.|.|..:||||:|.|....:.:.:|.|||||||:|:||:::.|||..
  Rat   332 KQTPKDKEMVLLEIEVMNQLNHRNLIQLYSAIETSHEIILFMEYIEGGELFERIVDEDYQLTEVD 396

  Fly   132 CRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPE 196
            ..||:||:|:.:.|:|...::||||||||||.:...|:.:|||||||||:::|:::|:|.|||||
  Rat   397 TMVFVRQICDGILFMHKMRVLHLDLKPENILCVNTTGHLVKIIDFGLARRYNPNEKLKVNFGTPE 461

  Fly   197 FVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPE 261
            |::|||||:|.||..|||||:|||.|:|:||||||:|::|.||::||..|.:.|::|.|..:|.|
  Rat   462 FLSPEVVNYDQISDKTDMWSLGVITYMLLSGLSPFLGDDDTETLNNVLSANWYFDEETFEAVSDE 526

  Fly   262 CLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAATATPITKAASAASKSRLKS 316
            ..||::.|:.||.|.||:|.:|:.|.||..          :.:.|...:: ||||
  Rat   527 AKDFVSNLITKDQSARMSAEQCLAHPWLNN----------LAEKAKRCNR-RLKS 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 125/254 (49%)
STKc_MLCK 40..289 CDD:271005 125/248 (50%)
Mylk2NP_476557.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..168
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..240
PKc_like 295..554 CDD:419665 125/258 (48%)
Calmodulin-binding. /evidence=ECO:0000250 588..600
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H13223
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000818
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24347
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2697
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.910

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