DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and camk1g

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_004910791.1 Gene:camk1g / 100494644 XenbaseID:XB-GENE-6085002 Length:733 Species:Xenopus tropicalis


Alignment Length:748 Identity:186/748 - (24%)
Similarity:304/748 - (40%) Gaps:163/748 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMNSLQHHLIIQLYAAYEYQKMM 104
            :|.|.|..||..:.::.|...|.|.:........:::|.|:.::..::|..|:.|...||.....
 Frog    50 LGSGAFSEVYLVKHRSTGQHYALKCIKKVNSSRDKSLENEIAVLKRIKHENIVTLEDIYESSSHF 114

  Fly   105 CVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGNGIVHLDLKPENILVLT-QKG 168
            .:|::|:.|||||||:: :..|.||:.....||||..|:.::|.|||||.||||||:|.|| .:.
 Frog   115 YLVMQLVSGGELFDRIL-ERGVYTEKDASNVIRQVLSAVKYLHDNGIVHRDLKPENLLYLTPDEN 178

  Fly   169 NRIKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMG 233
            ::|.|.||||: |.:.:..:....|||.:|||||:.....|...|.||:|||.|:|:.|..||..
 Frog   179 SKIMITDFGLS-KMEENGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 242

  Fly   234 ENDIETMSNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTRMTAAECMKHKWLQQRPATAAT 298
            |.:......:....|:||...::.||....|||:.||.||...|....:.:||.|:         
 Frog   243 ETESRLFEKIREGAYEFESPFWDDISKSAKDFISCLLEKDSKKRYNCEKALKHPWI--------- 298

  Fly   299 ATPITKAASAASKSRLKSVSPVTAPSESSEDSTETIEDEDDEEEVAVQQAKQKDQQQDEELANLC 363
                                           :..|....|....|::|..|...:.:.::..|..
 Frog   299 -------------------------------AGNTALHRDIYRSVSIQIKKNFAKSKWKQAFNAA 332

  Fly   364 ------GDAELENKELDATKDNLKNFIVRWETHPNSPYVFDVE--GNVIAPLSETSYPHPRRTHG 420
                  ....:.|.:..|....:|   |...|.||:|.|.:.|  .||     |....||..::|
 Frog   333 TVVYHMKKLHMNNSQTSANVPTIK---VSDATRPNTPNVKNTEERNNV-----EILKLHPGVSNG 389

  Fly   421 ADSLS-SSRVCSP---------------SPCDSISTLTDDERGDIEDLPE---EDESRSAENESP 466
            ....| :::.|..               .||.|.|.         ..||.   :.:|...:|:| 
 Frog   390 MPVRSGTAKSCGTINVERNSCLGTVSVHEPCTSKSN---------NALPSHFGQPQSEERKNQS- 444

  Fly   467 RSVATPINESREKLFPTVATSSPSTPTPQHLFNENFDEFSGSQSTAQQQRSMK---------SYL 522
            ::.:|.:|.:...|...|.:::|.:   :.:.::|..:...:|::......|:         .:|
 Frog   445 QNQSTELNSNSHMLSRGVQSNNPGS---RKMLSKNATQNCATQTSPDHHMPMEKNQSCMMKDDHL 506

  Fly   523 HTFDRRNSDTTYLLGRRSSGERVNLADEIRKLSDHLLMLAEINTKLGDAN----NNGSSSGAPAD 583
            |   |::|.:|       .|.:.::...:.|.:.     .:.|||....|    .|.|.|   .|
 Frog   507 H---RKSSSST-------KGSQASVTVSVNKPAQ-----KDSNTKEQKQNILSTKNISHS---LD 553

  Fly   584 PPAAAAAAAAPVPTSTAPAS---VAPSGSTSSKTSEISQEGNRWTSKTTSSSSWNRPTLKGGLFS 645
            .|      :.||..|.:|.|   ..||.::.||.|.:        .|:.|.||..:|        
 Frog   554 LP------SPPVHNSESPKSSLRKTPSTNSPSKKSAV--------PKSISISSSQKP-------- 596

  Fly   646 QASSSSQSQSTYDDGKGKTKISSLSVRLQQSIEETPKLSNGNSSSSKSLVQSQRKST----VQTM 706
            ..|..|..|.|.     ..||.|.::..|.|:::  .|...|:|..||.:......|    .:.:
 Frog   597 PPSQKSPVQVTL-----SPKIPSENIVAQTSVQD--HLDRRNTSPKKSTLDYNTLCTDMPQCRPL 654

  Fly   707 SSSNARSFTNQQVQRTSTTSSKVISSSTRSSNT 739
            ..||. .|...::    :.|:.|..::..||.|
 Frog   655 DLSNG-PFKTDKI----SASANVYVTNGMSSET 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 90/249 (36%)
STKc_MLCK 40..289 CDD:271005 90/249 (36%)
camk1gXP_004910791.1 STKc_CaMKI_gamma 40..324 CDD:271068 96/315 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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