DRSC/TRiP Functional Genomics Resources

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Protein Alignment sqa and si:ch73-60h1.1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_002663771.2 Gene:si:ch73-60h1.1 / 100332381 ZFINID:ZDB-GENE-140106-152 Length:438 Species:Danio rerio


Alignment Length:340 Identity:105/340 - (30%)
Similarity:176/340 - (51%) Gaps:17/340 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RDVTINRNVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIPKREDKRNVEREVEIMN 84
            ||.|:      ...|::..|:|||....|.:|.:|......|.|.  :.|..||:.|..|:.::.
Zfish    20 RDATV------EDFYNMGPELGRGATSVVLRCEEKQTEKPYAVKV--LKKTIDKKIVRTEIGVLL 76

  Fly    85 SLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCRVFIRQVCEAMAFIHGN 149
            .|.|..||:|...:|.:..:.::|||:.|||||||:|:..: .:||.....|:|:.||:|::|.|
Zfish    77 RLSHPNIIRLKEIFETETEIFLILELVTGGELFDRIVERGY-YSERDAAHVIKQILEAVAYLHEN 140

  Fly   150 GIVHLDLKPENILVLTQKGNR-IKIIDFGLARKFDPDKRLRVLFGTPEFVAPEVVNFDCISYGTD 213
            |:||.||||||:|......:. :||.||||::..|....::.:.|||.:.|||::..:......|
Zfish   141 GVVHRDLKPENLLYADLSIDAPLKIADFGLSKIIDEQVTMKTVCGTPGYCAPEILRGNAYGPEVD 205

  Fly   214 MWSVGVICYVLISGLSPFMGENDIETM-SNVTIAKYDFEDECFNGISPECLDFIAKLLAKDLSTR 277
            |||||||.|:|:.|..||..:...:.| |.:....|:|....::.:|....|.:.||:..|...|
Zfish   206 MWSVGVILYILLCGFEPFFDQRGDQYMYSRILNCDYEFVSPWWDEVSLNAKDLVNKLIVLDPHKR 270

  Fly   278 MTAAECMKHKWLQQRPATAATATPITKA-----ASAASKSRLKSVSPVTAPSESSEDSTETIEDE 337
            :|..:.::|.|:..:.|..:......:.     |....|:.:|:|...:...|.|...|::.| .
Zfish   271 LTVKQALEHPWVLGKAARFSHMDTTQRKLQEFNARRKLKAAMKAVVATSRMHEGSRRRTDSCE-M 334

  Fly   338 DDEEEVAVQQAKQKD 352
            .:.::.:.|.:.||:
Zfish   335 PNTDKTSCQSSIQKE 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 89/256 (35%)
STKc_MLCK 40..289 CDD:271005 87/250 (35%)
si:ch73-60h1.1XP_002663771.2 STKc_CaMKIV 24..317 CDD:270987 95/301 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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