DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sqa and ttn.1

DIOPT Version :9

Sequence 1:NP_001260832.1 Gene:sqa / 36002 FlyBaseID:FBgn0259678 Length:888 Species:Drosophila melanogaster
Sequence 2:XP_021334746.1 Gene:ttn.1 / 100001684 ZFINID:ZDB-GENE-030616-413 Length:28035 Species:Danio rerio


Alignment Length:396 Identity:129/396 - (32%)
Similarity:211/396 - (53%) Gaps:43/396 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IDDSEPEGVLEPAFPMRDVTINRNVDAHKHYDVLGEVGRGKFGTVYKCRDKANGLQLAAKFVPIP 68
            :||:.|  |.:...|..:.   :||  |..|.:..|:|||:||.|::|.:.::.....||||.: 
Zfish 26048 VDDTRP--VSKGKAPHSEA---KNV--HNKYMIAEELGRGQFGIVHRCIETSSEKTYMAKFVKV- 26104

  Fly    69 KREDKRNVEREVEIMNSLQHHLIIQLYAAYEYQKMMCVVLELIEGGELFDRVVDDEFVLTERVCR 133
            |..|:..|::|:..:|..:|...:.|:.:::..:.:.::.|.|.|.::|:|:....|.|:|  |.
Zfish 26105 KGADQALVKKEIATLNVARHKNFLLLHESFDSPEELVMIYEFISGVDIFERLGTANFELSE--CE 26167

  Fly   134 V--FIRQVCEAMAFIHGNGIVHLDLKPENILVLTQKGNRIKIIDFGLARKFDPDKRLRVLFGTPE 196
            :  :|||||||:.|:|.....|.|::||||:..|:|||.:|||:.|.:|...|..::::.:.|.|
Zfish 26168 IVNYIRQVCEALEFLHSKSYGHFDIRPENIVYTTRKGNNVKIIELGQSRHLIPGDQIKIQYTTAE 26232

  Fly   197 FVAPEVVNFDCISYGTDMWSVGVICYVLISGLSPFMGENDIETMSNVTIAKYDFEDECFNGISPE 261
            |.|||:...:.:|..||||||||:.|||:|||:||..|.:...:.::..|:|.||||.|..:|.|
Zfish 26233 FAAPEIHQNEMVSTVTDMWSVGVLVYVLLSGLNPFAAETNQRMIESICNAEYSFEDEAFKHVSVE 26297

  Fly   262 CLDFIAKLLAKDLSTRMTAAECMKHKWL----QQRPATAATAT---------------PITKAAS 307
            .||||.:||.|:...||||.|.:.|.||    :|..:.:...|               .:..:|.
Zfish 26298 ALDFIDRLLTKERKHRMTATEALNHPWLTMGSEQLSSRSIKITRHKRYYQAMVKKEWNTVVSSAR 26362

  Fly   308 AASKSRLKSVSPVT------APSESSEDSTE---TIEDEDDEEEVAVQQAKQKDQQQDEELANLC 363
            .||...::|...||      ||.|....:.:   :|.:|.|:.::.   ....:.....|:...|
Zfish 26363 VASGGSIRSQRGVTISKVKIAPFEHGPVAGQIKHSIANEGDDIKLI---CNIDNYDSTTEVTWYC 26424

  Fly   364 GDAELE 369
            |..:||
Zfish 26425 GVRQLE 26430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sqaNP_001260832.1 S_TKc 34..289 CDD:214567 100/256 (39%)
STKc_MLCK 40..289 CDD:271005 98/250 (39%)
ttn.1XP_021334746.1 I-set 6..95 CDD:254352
I-set 104..193 CDD:254352
DNA_pol3_delta2 <235..>332 CDD:331068
I-set 393..482 CDD:254352
I-set 537..626 CDD:254352
I-set 739..829 CDD:333254
I-set 882..972 CDD:254352
I-set 981..1072 CDD:333254
I-set 1128..1219 CDD:254352
I-set 1266..1354 CDD:254352
I-set 1506..1596 CDD:254352
I-set 1604..1677 CDD:333254
I-set 1696..1778 CDD:333254
I-set 1787..1857 CDD:333254
I-set 1875..1958 CDD:333254
I-set 1963..2045 CDD:333254
I-set 2052..2132 CDD:333254
I-set 2136..2220 CDD:333254
I-set 2224..2307 CDD:333254
I-set 2311..2394 CDD:333254
I-set 2399..2481 CDD:333254
I-set 2487..2570 CDD:333254
I-set 2583..2661 CDD:333254
I-set 2667..2756 CDD:254352
I-set 2773..2861 CDD:254352
I-set 2926..3015 CDD:254352
I-set <3114..3178 CDD:333254
I-set 3199..3288 CDD:254352
I-set 3295..3383 CDD:333254
I-set 3390..3477 CDD:333254
I-set 3485..3572 CDD:333254
I-set 3580..3668 CDD:333254
I-set 3675..3763 CDD:254352
I-set 3770..3858 CDD:333254
I-set 3867..3955 CDD:254352
I-set 3964..4053 CDD:254352
I-set 4082..4170 CDD:254352
I-set 4275..4343 CDD:333254
I-set 4372..4458 CDD:254352
Neuromodulin_N <4484..5173 CDD:331332
Neuromodulin_N <4932..5698 CDD:331332
MIP-T3 5601..>5845 CDD:313469
I-set 5875..5966 CDD:254352
IG_like 5979..6056 CDD:214653
I-set 6065..6155 CDD:333254
I-set 6154..6233 CDD:333254
I-set 6243..6327 CDD:333254
I-set 6333..6415 CDD:333254
I-set 6422..6503 CDD:333254
I-set 6509..6592 CDD:333254
I-set 6598..6673 CDD:333254
I-set 6687..6770 CDD:333254
I-set 6775..6859 CDD:333254
I-set 6865..6948 CDD:333254
I-set 6956..7037 CDD:333254
I-set 7043..7126 CDD:333254
I-set 7132..7204 CDD:333254
I-set 7221..7292 CDD:333254
I-set 7310..7393 CDD:333254
I-set 7398..7486 CDD:333254
I-set 7492..7575 CDD:254352
I-set 7582..7651 CDD:333254
I-set 7670..7743 CDD:333254
Ig 7773..7843 CDD:325142
FN3 7847..7938 CDD:238020
FN3 7947..8036 CDD:238020
FN3 8048..8137 CDD:238020
Ig 8170..8240 CDD:325142
FN3 8244..8329 CDD:238020
FN3 8344..8428 CDD:238020
Ig 8463..8536 CDD:325142
FN3 8540..8631 CDD:238020
FN3 8639..8728 CDD:238020
FN3 8740..8828 CDD:238020
FN3 8840..8926 CDD:238020
FN3 8940..9033 CDD:238020
FN3 9041..9134 CDD:238020
I-set 9143..9232 CDD:333254
FN3 9236..9322 CDD:238020
FN3 9336..9428 CDD:238020
Ig 9457..9559 CDD:325142
FN3 9563..9654 CDD:238020
FN3 9664..9752 CDD:238020
FN3 9770..9855 CDD:238020
Ig 9882..9954 CDD:325142
FN3 9958..10047 CDD:238020
FN3 10056..10147 CDD:238020
Ig 10176..10255 CDD:325142
FN3 10259..10352 CDD:238020
FN3 10360..10457 CDD:238020
FN3 10466..10558 CDD:238020
Ig 10588..10669 CDD:325142
FN3 10673..10764 CDD:238020
FN3 10773..10866 CDD:238020
I-set 10880..10974 CDD:333254
FN3 10978..11068 CDD:238020
FN3 11078..11174 CDD:238020
FN3 11189..11269 CDD:238020
Ig 11302..11373 CDD:325142
FN3 11377..11462 CDD:238020
FN3 11478..11571 CDD:238020
Ig 11603..11669 CDD:325142
FN3 11673..11765 CDD:238020
FN3 11773..11862 CDD:238020
FN3 11874..11966 CDD:238020
Ig_Titin_like 11996..12065 CDD:319305
FN3 12071..12158 CDD:238020
FN3 12171..12261 CDD:238020
Ig 12288..12361 CDD:325142
FN3 12365..12450 CDD:214495
FN3 12467..12555 CDD:238020
FN3 12567..12659 CDD:238020
Ig 12688..12760 CDD:325142
FN3 12764..12852 CDD:238020
FN3 12863..12954 CDD:238020
Ig_Titin_like 12980..13055 CDD:319305
FN3 13059..13150 CDD:238020
FN3 13158..13251 CDD:238020
FN3 13259..13358 CDD:238020
Ig 13385..13457 CDD:325142
FN3 13461..13545 CDD:238020
FN3 13561..13693 CDD:238020
Ig 13717..13790 CDD:325142
FN3 13794..13884 CDD:238020
FN3 13894..13987 CDD:238020
FN3 13993..14086 CDD:238020
I-set 14109..14187 CDD:333254
FN3 14191..14284 CDD:238020
FN3 14292..14383 CDD:238020
FN3 14393..14481 CDD:238020
Ig 14514..14587 CDD:325142
FN3 14591..14682 CDD:238020
FN3 14688..14769 CDD:238020
Ig_Titin_like 14803..14877 CDD:319305
FN3 14881..14965 CDD:238020
FN3 14981..15071 CDD:238020
FN3 15080..15169 CDD:238020
Ig_Titin_like 15207..15274 CDD:319305
FN3 15278..15369 CDD:238020
FN3 15377..15466 CDD:238020
FN3 15478..15570 CDD:238020
Ig_Titin_like 15598..15669 CDD:319305
FN3 15673..15760 CDD:238020
FN3 15770..15860 CDD:238020
Ig_Titin_like 15887..15960 CDD:319305
FN3 15964..16056 CDD:238020
FN3 16064..16154 CDD:238020
FN3 16163..16258 CDD:238020
Ig 16284..16356 CDD:325142
FN3 16360..16452 CDD:238020
FN3 16460..16552 CDD:238020
FN3 16561..16651 CDD:238020
Ig_Titin_like 16684..16755 CDD:319305
FN3 16759..16848 CDD:238020
FN3 16856..16939 CDD:238020
Ig 16971..17044 CDD:325142
FN3 17048..17140 CDD:238020
FN3 17148..17238 CDD:238020
FN3 17247..17336 CDD:238020
Ig_Titin_like 17367..17440 CDD:319305
FN3 17444..17536 CDD:238020
FN3 17544..17636 CDD:238020
FN3 17645..17752 CDD:238020
Ig_Titin_like 17785..17856 CDD:319305
FN3 17860..17946 CDD:238020
FN3 17960..18040 CDD:238020
Ig_Titin_like 18072..18144 CDD:319305
FN3 18149..18232 CDD:238020
FN3 18249..18332 CDD:238020
FN3 18348..18434 CDD:238020
Ig_Titin_like 18468..18541 CDD:319305
FN3 18545..18637 CDD:238020
FN3 18645..18735 CDD:238020
FN3 18746..18833 CDD:238020
Ig_Titin_like 18867..18938 CDD:319305
FN3 18942..19032 CDD:238020
FN3 19039..19122 CDD:238020
Ig_Titin_like 19154..19227 CDD:319305
FN3 19231..19324 CDD:238020
FN3 19339..19421 CDD:238020
FN3 19430..19523 CDD:238020
Ig 19553..19623 CDD:325142
FN3 19627..19719 CDD:238020
FN3 19727..19811 CDD:238020
FN3 <19848..19916 CDD:238020
Ig_Titin_like 19949..20020 CDD:319305
FN3 20024..20115 CDD:238020
FN3 20121..20204 CDD:238020
Ig_Titin_like 20236..20309 CDD:319305
FN3 20313..20400 CDD:238020
FN3 20412..20504 CDD:238020
FN3 20511..20604 CDD:238020
Ig_Titin_like 20632..20697 CDD:319305
FN3 20715..20801 CDD:238020
FN3 20808..20898 CDD:238020
FN3 20909..21000 CDD:238020
Ig_Titin_like 21028..21099 CDD:319305
FN3 21103..21194 CDD:238020
FN3 21200..21283 CDD:238020
Ig 21318..21391 CDD:325142
FN3 21395..21488 CDD:238020
FN3 21495..21585 CDD:238020
FN3 21594..21680 CDD:238020
Ig 21714..21787 CDD:325142
FN3 21791..21883 CDD:238020
FN3 21891..21983 CDD:238020
FN3 21995..22078 CDD:238020
Ig_Titin_like 22113..22187 CDD:319305
FN3 22191..22280 CDD:238020
FN3 22288..22379 CDD:238020
Ig 22405..22477 CDD:325142
FN3 22482..22574 CDD:238020
FN3 22582..22675 CDD:238020
FN3 22681..22769 CDD:238020
Ig_Titin_like 22800..22872 CDD:319305
FN3 22878..22968 CDD:238020
FN3 22976..23069 CDD:238020
FN3 23078..23162 CDD:238020
Ig 23198..23269 CDD:325142
FN3 23273..23356 CDD:238020
FN3 23370..23453 CDD:238020
Ig_Titin_like 23488..23561 CDD:319305
FN3 23565..23657 CDD:238020
FN3 23665..23754 CDD:238020
FN3 23764..23860 CDD:238020
Ig 23891..23961 CDD:325142
FN3 23965..24047 CDD:238020
FN3 24064..24152 CDD:238020
FN3 24166..24254 CDD:238020
Ig_Titin_like 24286..24357 CDD:319305
FN3 24361..24452 CDD:238020
FN3 24458..24551 CDD:238020
Ig 24578..24651 CDD:325142
FN3 24655..24746 CDD:238020
FN3 24755..24841 CDD:238020
FN3 24856..24949 CDD:238020
Ig_Titin_like 24976..25047 CDD:319305
FN3 25051..25140 CDD:238020
FN3 25159..25237 CDD:238020
FN3 25253..25338 CDD:238020
I-set 25364..25439 CDD:254352
Ig 25465..25531 CDD:325142
FN3 25546..25632 CDD:238020
FN3 25645..25732 CDD:238020
I-set 25748..25839 CDD:254352
Ig_Titin_like 25864..25938 CDD:319305
FN3 25942..26029 CDD:238020
STKc_Titin 26070..26346 CDD:271006 104/278 (37%)
I-set 26393..26478 CDD:254352 8/41 (20%)
I-set 26510..26602 CDD:254352
I-set 26615..26703 CDD:254352
I-set 27166..27255 CDD:254352
Ig_Titin_like 27376..27467 CDD:143224
I-set 27534..27623 CDD:254352
I-set 27665..27743 CDD:333254
I-set 27751..27840 CDD:254352
I-set 27940..28032 CDD:254352
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D184at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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