DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10459 and AT1G52730

DIOPT Version :10

Sequence 1:NP_610513.2 Gene:CG10459 / 36000 FlyBaseID:FBgn0033440 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_175682.2 Gene:AT1G52730 / 841706 AraportID:AT1G52730 Length:343 Species:Arabidopsis thaliana


Alignment Length:314 Identity:101/314 - (32%)
Similarity:144/314 - (45%) Gaps:13/314 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LCPGHSDSVVELSFNRDYDTGYFLASAGLDGVAALRHGDTGDCITHLRKHTDSVWSVSLSHDAKI 72
            :|.|||..||:|.::.....|:||.||..|....||:|:|||.|.....|..:|||..|.::|..
plant    11 VCHGHSRPVVDLFYSPITPDGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALR 75

  Fly    73 LASGGADCKVRVWDALLGKQLKKLRHTKTVACVDLNPKATRLLTGCIDQESPLALFDMEQSEKAP 137
            .||..||...::||||.|..|....|...|.....:.....||||..  |..|.:|||.:.: ||
plant    76 AASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSEDTKSLLTGGF--EKILRVFDMNRLD-AP 137

  Fly   138 LMEFRGHSRGVRDVIFCLEEHCFLSSSYD-RTVRMWDCRTGTRTNSIFLPHHVKSLELHHSGDIV 201
            ..|.......:|.:.:...:...|||..| ..||:||.|:|....::.....|.|.|:...|..:
plant   138 PTEVDKSPGSIRTLTWLHSDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRYI 202

  Fly   202 TIAYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPNKG-IYVCGNNMGYSFKYDYDTDVDRGLYV 265
            |.|....|.|.|...|.::|...:|..:.:|||.|..| .:|.|....:...:|:.|..:.|...
plant   203 TTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGEKFVAGGEDMWVRVFDFYTGEEIGCNK 267

  Fly   266 SQEPSAVLALSFSPDGEVCAIGSQDGSIILWQ---MNPKQASV----VGHLKDE 312
            ... ..|..:.|:|.|...|.||:||:|.:||   .||::...    |.|..||
plant   268 GHH-GPVHCVRFTPTGLSYASGSEDGTIRIWQTTPANPEENETSSRRVKHSVDE 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10459NP_610513.2 WD40 <11..299 CDD:441893 94/292 (32%)
WD40 repeat 61..97 CDD:293791 15/35 (43%)
WD40 repeat 103..143 CDD:293791 12/39 (31%)
WD40 repeat 148..185 CDD:293791 11/37 (30%)
WD40 repeat 190..222 CDD:293791 9/31 (29%)
WD40 repeat 229..264 CDD:293791 10/35 (29%)
WD40 repeat 272..298 CDD:293791 12/28 (43%)
AT1G52730NP_175682.2 WD40 <7..300 CDD:441893 95/292 (33%)
WD40 repeat 106..143 CDD:293791 12/39 (31%)
WD40 repeat 148..185 CDD:293791 11/36 (31%)
WD40 repeat 191..225 CDD:293791 10/33 (30%)
WD40 repeat 230..267 CDD:293791 10/36 (28%)
WD40 repeat 273..314 CDD:293791 14/40 (35%)

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