DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10459 and AT3G15610

DIOPT Version :10

Sequence 1:NP_610513.2 Gene:CG10459 / 36000 FlyBaseID:FBgn0033440 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_566519.1 Gene:AT3G15610 / 820803 AraportID:AT3G15610 Length:341 Species:Arabidopsis thaliana


Alignment Length:303 Identity:97/303 - (32%)
Similarity:144/303 - (47%) Gaps:9/303 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VLCPGHSDSVVELSFNRDYDTGYFLASAGLDGVAALRHGDTGDCITHLRKHTDSVWSVSLSHDAK 71
            ::|.|||..||:|.::.....|:||.||..|....||:|:|||.|.....|..:|||..|.::|.
plant    10 LVCHGHSRPVVDLFYSPITPDGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNAL 74

  Fly    72 ILASGGADCKVRVWDALLGKQLKKLRHTKTVACVDLNPKATRLLTGCIDQESPLALFDMEQSEKA 136
            ..||..||...::||||.|..|....|...|.....:.....|:||..  |..|.:||:.:.: |
plant    75 RAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQDTKYLITGGF--EKILRVFDLNRLD-A 136

  Fly   137 PLMEFRGHSRGVRDVIFCLEEHCFLSSSYD-RTVRMWDCRTGTRTNSIFLPHHVKSLELHHSGDI 200
            |..|.......:|.:.:...:...|||..| ..||:||.|:|....::.....|.|.|:...|..
plant   137 PPTEIDKSPGSIRTLTWLHGDQTILSSCTDIGGVRLWDVRSGKIVQTLETKSPVTSAEVSQDGRY 201

  Fly   201 VTIAYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPNKG-IYVCGNNMGYSFKYDYDTDVDRGLY 264
            :|.|....|.|.|...|.::|...:|..:.:|||.|..| .:|.|....:...:|:.|..:.|..
plant   202 ITTADGSTVKFWDANHFGLVKSYDMPCNIESASLEPKSGNKFVAGGEDMWVRLFDFHTGKEIGCN 266

  Fly   265 VSQEPSAVLALSFSPDGEVCAIGSQDGSIILWQ---MNPKQAS 304
            .... ..|..:.|:|.||..|.||:||:|.:||   :||::.|
plant   267 KGHH-GPVHCVRFAPTGESYASGSEDGTIRIWQTGPVNPEEIS 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10459NP_610513.2 WD40 <11..299 CDD:441893 93/292 (32%)
WD40 repeat 61..97 CDD:293791 15/35 (43%)
WD40 repeat 103..143 CDD:293791 10/39 (26%)
WD40 repeat 148..185 CDD:293791 11/37 (30%)
WD40 repeat 190..222 CDD:293791 9/31 (29%)
WD40 repeat 229..264 CDD:293791 10/35 (29%)
WD40 repeat 272..298 CDD:293791 13/28 (46%)
AT3G15610NP_566519.1 WD40 <7..299 CDD:441893 93/292 (32%)
WD40 repeat 20..59 CDD:293791 15/38 (39%)
WD40 repeat 106..143 CDD:293791 10/39 (26%)
WD40 repeat 148..185 CDD:293791 11/36 (31%)
WD40 repeat 191..225 CDD:293791 10/33 (30%)
WD40 repeat 230..267 CDD:293791 10/36 (28%)

Return to query results.
Submit another query.