DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10459 and Strap

DIOPT Version :10

Sequence 1:NP_610513.2 Gene:CG10459 / 36000 FlyBaseID:FBgn0033440 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001011969.1 Gene:Strap / 297699 RGDID:1311114 Length:350 Species:Rattus norvegicus


Alignment Length:316 Identity:115/316 - (36%)
Similarity:162/316 - (51%) Gaps:19/316 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CPGHSDSVVELSFNRDYDTGYFLASAGLDGVAALRHGDTGDCITHLRKHTDSVWSVSLSHDAKIL 73
            |.||:..||:|:|:.....||||.||..||...||.|||||.|.....|..:||..:|:.||...
  Rat    10 CSGHTRPVVDLAFSGITPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKA 74

  Fly    74 ASGGADCKVRVWDALLGKQLKKLRHTKTVACVDLNPKATRLLTGCIDQESPLALFDMEQSEKAPL 138
            |:..||...:||||:.|.:|..|.|...|..||....:..||||  .|:..|.::|:.:.|..| 
  Rat    75 ATAAADFTAKVWDAVSGDELMTLAHKHIVKTVDFTQDSNYLLTG--GQDKLLRIYDLNKPEAEP- 136

  Fly   139 MEFRGHSRGVRDVIFCLEEHCFLSSSYDRTVRMWDCRTGTRTNSIFLPHHVKSLELHHSGDIVTI 203
            .|..||:.|::..::|.|:...||:. |:|||:||..|.|...|:.....|.|:|....|:|:.|
  Rat   137 KEISGHTSGIKKALWCSEDKQILSAD-DKTVRLWDHATMTEVKSLNFNMSVSSMEYIPEGEILVI 200

  Fly   204 AYAGGVIFLDPKSFEVLKHRKLPYKVTAASLSPNKGIYVCGNNMGYSFKYDYDTDVDRGLYVSQE 268
            .|...:.|....|.|.:|..:.|..:.:|||.|.|...|.|......:||||::..:...|....
  Rat   201 TYGRSIAFHSAVSLEPIKSFEAPATINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHF 265

  Fly   269 PSAVLALSFSPDGEVCAIGSQDGSIILWQMNPKQASVVGH--------LKDEDDGE 316
             ..:..:.||||||:.|.||:||::.|||      :|||.        |.:||.||
  Rat   266 -GPIHCVRFSPDGELYASGSEDGTLRLWQ------TVVGKTYGLWKCVLPEEDSGE 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10459NP_610513.2 WD40 <11..299 CDD:441893 106/287 (37%)
WD40 repeat 61..97 CDD:293791 14/35 (40%)
WD40 repeat 103..143 CDD:293791 12/39 (31%)
WD40 repeat 148..185 CDD:293791 13/36 (36%)
WD40 repeat 190..222 CDD:293791 9/31 (29%)
WD40 repeat 229..264 CDD:293791 11/34 (32%)
WD40 repeat 272..298 CDD:293791 13/25 (52%)
StrapNP_001011969.1 WD40 <4..294 CDD:441893 107/294 (36%)
WD 1 12..56 22/43 (51%)
WD 2 57..96 15/38 (39%)
WD 3 98..137 13/41 (32%)
WD40 repeat 104..141 CDD:293791 12/39 (31%)
WD 4 141..179 15/38 (39%)
WD40 repeat 146..181 CDD:293791 13/35 (37%)
WD 5 180..212 8/31 (26%)
WD40 repeat 187..221 CDD:293791 10/33 (30%)
WD 6 221..262 12/40 (30%)
WD40 repeat 226..262 CDD:293791 11/35 (31%)
WD 7 263..302 17/45 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..350
Blue background indicates that the domain is not in the aligned region.

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