DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1773 and ndl

DIOPT Version :9

Sequence 1:NP_610512.1 Gene:CG1773 / 35999 FlyBaseID:FBgn0033439 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_523947.2 Gene:ndl / 38738 FlyBaseID:FBgn0002926 Length:2616 Species:Drosophila melanogaster


Alignment Length:306 Identity:83/306 - (27%)
Similarity:132/306 - (43%) Gaps:71/306 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LAYEQLTQQDCGVLSN---LIPAQRLRR------------RITGGRKSSLLSQPWMAFLHISGDI 85
            :||.:.....||:.|.   |..::|:||            ||.||..:|.|..|::..::.:|..
  Fly  1104 VAYVKCPPMQCGLPSKSSMLEHSKRVRRAVSDSKEIVGDGRIVGGSYTSALQWPFVVAIYRNGKF 1168

  Fly    86 EMCRCGGSLLSELFVLTAAHCFKMCPRSK---EIRVWLGELDISSTSDCVTYNYQRVCALPVEEF 147
               .|||::.|:.::::||||  :....|   |:|.  |.|..||.|......       ||...
  Fly  1169 ---HCGGTIYSDRWIISAAHC--VINYGKYFYEVRA--GLLRRSSYSPATQIQ-------PVSHV 1219

  Fly   148 TIDKWILHEEFNLFYPGYDIALIKLNKKVVFKDHIRPICLPLTDELLAFTLQLGQSYM------- 205
                 ::|:.:.......|::|::|...:.|...::|||||....     ..:|..::       
  Fly  1220 -----VVHQAYERRSMRNDLSLLRLLNPLQFNRWVKPICLPDKGR-----TTVGDDWIWGPVEHT 1274

  Fly   206 ---AVGWGRTESRRFANSTME---VHINTEKCTDGRD--TSFLCANGD---YVDTCTGDSGGPLI 259
               .||||....:..::..|.   |.|. :||||..|  :..:|| ||   ..|.|.|||||||.
  Fly  1275 LCTVVGWGAIREKGPSSDPMRQVIVPIR-KKCTDPEDQASEDICA-GDPDGGRDACQGDSGGPLF 1337

  Fly   260 WKTTLFGKARTVQF---GVVSTGSQNCGAGQK-AYYMDVPTYVPWI 301
            .::.    :...:|   ||||.|: .|...|: ..|..|..|:.|:
  Fly  1338 CRSV----SNPDEFYLAGVVSHGN-GCARPQEFGVYTRVTLYLDWL 1378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1773NP_610512.1 Tryp_SPc 61..301 CDD:214473 73/264 (28%)
Tryp_SPc 62..301 CDD:238113 72/263 (27%)
ndlNP_523947.2 LDLa 891..927 CDD:238060
Tryp_SPc 1144..1377 CDD:214473 73/263 (28%)
Tryp_SPc 1145..1379 CDD:238113 73/265 (28%)
LDLa 1399..1430 CDD:238060
Metaviral_G 1448..1600 CDD:118131
LDLa 1710..1743 CDD:238060
LDLa 1776..1811 CDD:238060
DUF1986 2041..2158 CDD:286432
LDLa 2309..2339 CDD:197566
LDLa 2350..2383 CDD:197566
LDLa 2421..2457 CDD:238060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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