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Protein Alignment CG1773 and LOC100004411

DIOPT Version :9

Sequence 1:	NP_610512.1	Gene:	CG1773 / 35999	FlyBaseID:	FBgn0033439	Length:	317	Species:	Drosophila melanogaster
Sequence 2:	XP_001343728.4	Gene:	LOC100004411 / 100004411	-ID:	-	Length:	494	Species:	Danio rerio

Alignment Length:	353	Identity:	89/353 - (25%)
Similarity:	132/353 - (37%)	Gaps:	101/353 - (28%)

- Green bases have known domain annotations that are detailed below.

  Fly    18 SCPPSSQ--AGREDWT--------------------------------PHELLAYEQLTQQDCGV 48
            ||.|:.|  .|:: ||                                .|...|.|..|.|:...
Zfish   163 SCSPAVQYPCGKQ-WTGGIMSRSLDDVSHTHADYANHTHSSTSPSHPLHHNRSALENSTHQNQTE 226

  Fly    49 LSNLIPAQRL-----------RRRITGGRKSSLLSQPWMAFLHISGDIEMCRCGGSLLSELFVLT 102
            |:  .|.|.|           ..||.||:.......||...|.  .:.|...|||||:::.:|:|
Zfish   227 LT--APDQLLDTGSDFTGGNEDTRIVGGQLQRQGGSPWQVLLR--REDEYGFCGGSLINQRWVIT 287

  Fly   103 AAHCFKMCPRSKEIRVWLGELD-ISSTSDCVTYNYQRVCALPVEEFTIDKWILHEEFNLFYPGYD 166
            ||||.:..|.    .:.:|:.| :....|             .::.|::|.|.|..::.:....|
Zfish   288 AAHCLQQTPH----HITIGDYDKMRPDKD-------------EQKITVEKIIPHPHYHEYTFDSD 335

  Fly   167 IALIKLNKKVVFKDHIRPICLP---LTDELLAFTLQLGQSYMAVGWGRT----ESRRFANSTMEV 224
            |||:.|:..|.......|.|||   |.:.|    ::.|:..:..|||.|    .|.||.......
Zfish   336 IALLYLSSAVTLGPFASPACLPDANLAERL----MKPGEQGLVSGWGSTHYLQRSSRFLRKVQLP 396

  Fly   225 HINTEKCTDGRD----TSFLCAN--GDYVDTCTGDSGGPLI------WKTTLFGKARTVQFGVVS 277
            .:..:.|.:..:    .:..||.  .:.:|.||||||||.|      |..|          ||||
Zfish   397 VVEQKSCINSTEQIITDNMFCAGFLMEEMDACTGDSGGPFIVNYRGTWFLT----------GVVS 451

  Fly   278 TGSQNCGAGQKAYYMDVPTYVPWILAKM 305
            .|.:....|:...|..:..|:.||..:|
Zfish   452 WGERCASQGKYGVYTRLGNYLSWIQEEM 479

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.