DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and UBA3

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_003959.3 Gene:UBA3 / 9039 HGNCID:12470 Length:463 Species:Homo sapiens


Alignment Length:650 Identity:128/650 - (19%)
Similarity:211/650 - (32%) Gaps:293/650 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 KKFQEK------------------LADS-KWFIVGAGAIGCELLKNFGMLGLGTGNGQIFVTDMD 641
            |||.|:                  |.|: |..::|||.:|||||||..:    :|..||.|.|||
Human    42 KKFLERSGPFTHPDFEPSTESLQFLLDTCKVLVIGAGGLGCELLKNLAL----SGFRQIHVIDMD 102

  Fly   642 LIEKSNLNRQFLFRPHDVQKPKSMTAADAIKRMNPEVNVTAYELRVGAETEKVFSEDFFGKLDGV 706
            .|:.|||||||||||.|:.:||:..||:.:....|..||..:..::     :.|::.|:.:...:
Human   103 TIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDRVPNCNVVPHFNKI-----QDFNDTFYRQFHII 162

  Fly   707 ANALDNVDARIYMDRKCI------------FNRIPLVETGTLGTLGNVQVIVPFATESYSSSQD- 758
            ...||::.||.:::...|            .:.:||::.||.|..||.:||:|..|.....:.: 
Human   163 VCGLDSIIARRWINGMLISLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLEL 227

  Fly   759 -PPEKSIPICTLKNFPNAIEHTLQWARDAFEGVFKQSAENAAQYIADPQFTERIAKLPGIQPLEI 822
             ||:.:.|:||:.:.|                                       :||       
Human   228 YPPQVNFPMCTIASMP---------------------------------------RLP------- 246

  Fly   823 LDSIKKALIDDKPKSFAHCVEWAR-LYWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKRCPDP 886
                            .||:|:.| |.|..:                     |||..|.     |
Human   247 ----------------EHCIEYVRMLQWPKE---------------------QPFGEGV-----P 269

  Fly   887 LVFDVNDPMHLDFIYAAANLRAEVYGIEQVRNRETIAELVQKVKVPEFKPRSGVKIETNEAAAAA 951
            |  |.:||.|:.:|:..:..||..|                                        
Human   270 L--DGDDPEHIQWIFQKSLERASQY---------------------------------------- 292

  Fly   952 SANNFDDGELDQDRVDKIISELLKNADKSSKITPLEFEKDDDSNLHMDFIVACSNLRAANYKIPP 1016
                                                                  |:|...|::  
Human   293 ------------------------------------------------------NIRGVTYRL-- 301

  Fly  1017 ADRHKSKLIAGKIIPAIATTTSVLSGLAVLEVIKLIVGHRDLVKFKNGFANLALPFMAFS----- 1076
                 ::.:..:||||:|:|.:|::.:...||.|:...  ..:...|        ::.|:     
Human   302 -----TQGVVKRIIPAVASTNAVIAAVCATEVFKIATS--AYIPLNN--------YLVFNDVDGL 351

  Fly  1077 ----------EPLPAAKNTYYGKEWTLWDRFEVTGELSLQEFLNYFEENEKLK-----ITMLSQG 1126
                      |..||...        |....:.:....|||.|:|...:..|:     ||...:|
Human   352 YTYTFEAERKENCPACSQ--------LPQNIQFSPSAKLQEVLDYLTNSASLQMKSPAITATLEG 408

  Fly  1127 VSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRRLEPHERSLVFEICCNDVDGEDVEVPYVRYTLP 1191
            .:... :........||....:|:.::.:..                  |||:::.|..|  |.|
Human   409 KNRTL-YLQSVTSIEERTRPNLSKTLKELGL------------------VDGQELAVADV--TTP 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 126/645 (20%)
Ube1_repeat1 199..574 CDD:238768
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 113/572 (20%)
UBA3NP_003959.3 Interaction with UBE2M N-terminus 53..70 2/16 (13%)
Uba3_RUB 71..368 CDD:238765 102/506 (20%)
Interaction with UBE2M N-terminus 157..161 0/3 (0%)
Interaction with UBE2M N-terminus 192..217 10/24 (42%)
Interaction with NEDD8 227..229 0/1 (0%)
Interaction with NAE1. /evidence=ECO:0000269|PubMed:12740388 242..248 3/67 (4%)
Interaction with NAE1. /evidence=ECO:0000269|PubMed:12740388 292..295 2/96 (2%)
Interaction with UBE2M N-terminus 331..338 0/8 (0%)
Interaction with NEDD8 352..357 0/4 (0%)
Interaction with UBE2M core domain 368..463 19/113 (17%)
E2_bind 376..461 CDD:400951 18/97 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.