DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba1 and UBA4

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_011979.1 Gene:UBA4 / 856511 SGDID:S000001153 Length:440 Species:Saccharomyces cerevisiae


Alignment Length:478 Identity:109/478 - (22%)
Similarity:180/478 - (37%) Gaps:123/478 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   499 EDANSFLEVVRASSNAEVDEKLVLQFAKICSGNTCPLDAAVGGIVAQEVLKACSGKFTPIYQWLY 563
            ||..|.||.:|. .||::.|    |.||                      :..|.:..|:     
Yeast     7 EDTTSELEALRL-ENAQLRE----QLAK----------------------REDSSRDYPL----- 39

  Fly   564 FDALECLPTEGVEEADAQPVGSRYDSQIAI---FGKKFQEKLADSKWFIVGAGAIGCELLKNFGM 625
                      .:||.      .||..|:.:   .|...|.||.::|..:||||.:||..|.... 
Yeast    40 ----------SLEEY------QRYGRQMIVEETGGVAGQVKLKNTKVLVVGAGGLGCPALPYLA- 87

  Fly   626 LGLGTGNGQIFVTDMDLIEKSNLNRQFLFRPHDVQKPKSMTAADAIKRMNPEVNVTAYELRVGAE 690
               |.|.|||.:.|.|::|.|||:||.|.....|...|..:|...|.::||.:||..|.:|:.:.
Yeast    88 ---GAGVGQIGIVDNDVVETSNLHRQVLHDSSRVGMLKCESARQYITKLNPHINVVTYPVRLNSS 149

  Fly   691 TEKVFSEDFFGKLDGVANALDNVDARIYMDRKCIFNRIPLVETGTLGTLGNVQV-----IVPFAT 750
            .    :.|.|...:.:.:..|:...|..:....:...|.:|....|||.|.:.:     |.|...
Yeast   150 N----AFDIFKGYNYILDCTDSPLTRYLVSDVAVNLGITVVSASGLGTEGQLTILNFNNIGPCYR 210

  Fly   751 ESYSSSQDPPEKSIPICT----------LKNFPNAIEHTLQWARDAFEGVFKQSAENAAQ----Y 801
            ..|.:  .||..::..|.          |.....|:| ||:    ...|::  :.||.:.    |
Yeast   211 CFYPT--PPPPNAVTSCQEGGVIGPCIGLVGTMMAVE-TLK----LILGIY--TNENFSPFLMLY 266

  Fly   802 IADPQFTERIAKLPGIQPLEILDSIKKALIDDKPKSFA-HCVEWARLYWEDQYVNQIKQLLF--- 862
            ...||.:.|..|:.|.|        :|.|...|.::.. ..:|...:.:|          ||   
Yeast   267 SGFPQQSLRTFKMRGRQ--------EKCLCCGKNRTITKEAIEKGEINYE----------LFCGA 313

  Fly   863 -NF----PPDQIT-SSGQPFWSGPKRCPDPLVFDVNDPMHLDFIY--AAANLRAEVYGIEQVRNR 919
             |:    |.::|: .:.|..:...:.....:..||....|.:..:  .|.|:     .|:.:|:.
Yeast   314 RNYNVCEPDERISVDAFQRIYKDDEFLAKHIFLDVRPSHHYEISHFPEAVNI-----PIKNLRDM 373

  Fly   920 ETIAELVQKVKVPEFKPRSGVKI 942
            ....:.:|: |:|..:..|.:.|
Yeast   374 NGDLKKLQE-KLPSVEKDSNIVI 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 109/478 (23%)
Ube1_repeat1 199..574 CDD:238768 14/74 (19%)
E1_4HB 447..510 CDD:292809 5/10 (50%)
Ube1_repeat2 606..1144 CDD:238767 86/368 (23%)
UBA4NP_011979.1 ThiF_MoeB_HesA_family 46..279 CDD:238386 67/249 (27%)
RHOD_ThiF 316..440 CDD:238784 15/86 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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