DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba1 and UBA3

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_015391.1 Gene:UBA3 / 856179 SGDID:S000006270 Length:299 Species:Saccharomyces cerevisiae


Alignment Length:277 Identity:74/277 - (26%)
Similarity:126/277 - (45%) Gaps:54/277 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   604 DSKWFIVGAGAIGCELLKNFGMLGLGTGNGQIFVTDMDLIEKSNLNRQFLFRPHDVQKPKSMTAA 668
            |.|..::|||.:|||:|||..||....   |:.:.|:|.||.:||||||||...|:.|||:..||
Yeast     2 DCKILVLGAGGLGCEILKNLTMLSFVK---QVHIVDIDTIELTNLNRQFLFCDKDIGKPKAQVAA 63

  Fly   669 DAIKRMNPEVNVTAYELRVGAETEKVFSEDFFGKLDGVANALDNVDARIYMDRK----------- 722
            ..:....|::.|.|:     .:........|:.....:.:.||.::.|.:::..           
Yeast    64 QYVNTRFPQLEVVAH-----VQDLTTLPPSFYKDFQFIISGLDAIEPRRFINETLVKLTLESNYE 123

  Fly   723 -CIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQD--PPEK-SIPICTLKNFPNAIEHTLQWA 783
             |    ||.::.||.|..|:|:.|:|..|..:..|.|  |.:: ::|:||:.|.|..|||.:::.
Yeast   124 IC----IPFIDGGTEGLKGHVKTIIPGITACWECSIDTLPSQQDTVPMCTIANNPRCIEHVVEYV 184

  Fly   784 RDA------------FEGVFKQSAENAAQYIADPQFTERIAKLPGIQPLEILDSIKKALIDDKPK 836
            ...            .|.:.::..|.|||:...   ||:::       ...:..|.|::|.....
Yeast   185 STIQYPDLNIESTADMEFLLEKCCERAAQFSIS---TEKLS-------TSFILGIIKSIIPSVST 239

  Fly   837 SFAH-----CVEWARLY 848
            :.|.     |.:..::|
Yeast   240 TNAMVAATCCTQMVKIY 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 74/277 (27%)
Ube1_repeat1 199..574 CDD:238768
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 73/275 (27%)
UBA3NP_015391.1 Uba3_RUB 4..294 CDD:238765 73/275 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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