DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and ULA1

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_015322.1 Gene:ULA1 / 856104 SGDID:S000005924 Length:462 Species:Saccharomyces cerevisiae


Alignment Length:549 Identity:97/549 - (17%)
Similarity:184/549 - (33%) Gaps:163/549 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   586 RYDSQIAIFGKKFQEKLADSKWFIVG-AGAIGCELLKNFGMLGLGT----------GNGQIFVTD 639
            |||.|:.::|...|:.|..|:..:|| |..:..|:.||..:.|:.:          .:|.:|:.:
Yeast     3 RYDRQLRLWGALGQDSLNRSRVCVVGPATPLLQEVFKNLVLAGISSLTWLKVECAVQSGSLFLAE 67

  Fly   640 MDLIEKSNLNRQFLFRPHDVQKPKSMTAADAIKRMNPEVNVTAYEL----RVGAETEKVFSEDFF 700
            :....:...::|..:..:|::|          ....|:.:.|.:.:    .:|.:|.        
Yeast    68 LKKDLEPLASKQLEYEENDLRK----------TLQQPQYDWTRFSVVILTCIGEQTA-------- 114

  Fly   701 GKLDGVANALDNVDARIYMDRKCIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQDPPEKSIP 765
                    .||..:.|.....|.    .|::.|...|..|.:.:::   :|::...|..|:....
Yeast   115 --------MLDLNEIRRQRGTKF----PPVLNTFVSGFYGYIYLVL---SETHFVLQAHPDSKKY 164

  Fly   766 ICTLKN-FPNAIEHTLQWARDAFEGVFKQSAENAAQYIADPQ---FTERIAKL--PGIQPLEILD 824
            ...|:| :|..|.:.     |.|:    .|..:.|.:...|.   ..:.||||  .|......:|
Yeast   165 DLRLQNPWPELINYV-----DTFD----LSKMDTATFSGIPYTVLLMKCIAKLERDGNNGRITID 220

  Fly   825 SIKKAL-----------------IDDKPKSFAHCVEWARLYWEDQYVNQIKQLLFNFPPDQITSS 872
            .:||.|                 ::.|..::..|.       ::....:::.||.|..       
Yeast   221 QMKKVLDQICLPLGNDVIYEPNYVEAKRYAYLACS-------QNDCCKELEDLLRNLE------- 271

  Fly   873 GQPFWSGPKRCPDPLVFDVNDPMHLDFIYAAANLRAEVYGIEQVRNRETIAELVQKVKVPEFKPR 937
                           :.|..:..|            :.|..|.:....|:..:.::.....|:|.
Yeast   272 ---------------ISDYGNDWH------------DTYNYEILTLLLTLKNIAKENGELSFQPL 309

  Fly   938 SGVKIETNEAAAAASANNF--------DDGELDQDRVD-------KIISE-----LLKNADKSSK 982
            :|...:..     ::..|:        ...:||:.||:       ||:|:     ...:..:..|
Yeast   310 TGTLPDME-----STTENYIRLKKLYEVKAKLDKSRVEESLARSKKIVSQDVLETFCSHYGEVRK 369

  Fly   983 ITPLEFEKDD------DSNLHMDFIVACSNLRAANYKIPPADRHKSKLIAGKIIPAIATTTSVLS 1041
            |.|   .|.|      .||..:|.:|     ....::.|...........|..:....:..:...
Yeast   370 ILP---PKSDLLGIFSTSNALLDALV-----MVQFWEQPAVTAEDKDEFIGLRVDDNYSVMAFFG 426

  Fly  1042 GLAVLEVIKLIVGHR---DLVKFKNGFAN 1067
            |..|.|.||||..|.   |.:...||..|
Yeast   427 GAVVQEAIKLITHHYVPIDNLFLYNGINN 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 97/549 (18%)
Ube1_repeat1 199..574 CDD:238768
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 89/529 (17%)
ULA1NP_015322.1 E1_enzyme_family 2..460 CDD:304554 97/549 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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