DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba1 and mRpL36

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_652658.1 Gene:mRpL36 / 59151 FlyBaseID:FBgn0042112 Length:128 Species:Drosophila melanogaster


Alignment Length:60 Identity:18/60 - (30%)
Similarity:24/60 - (40%) Gaps:11/60 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 RPWNE-EDANSFLEVVRASSNAEV---DEKLVLQFAKIC--SGNTCPLDAAVGGIVAQEV 547
            |.||. ..|..|..:.|.::.|.|   ..:||.....||  ||...|     |..:.|:|
  Fly    13 RLWNGLSAARGFHLLTRPAAPAIVSIQSSQLVAATTGICQTSGLLTP-----GSTLVQQV 67

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 18/60 (30%)
Ube1_repeat1 199..574 CDD:238768 18/60 (30%)
E1_4HB 447..510 CDD:292809 5/16 (31%)
Ube1_repeat2 606..1144 CDD:238767
mRpL36NP_652658.1 Ribosomal_L36 70..105 CDD:376334
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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