DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and nae1

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_956793.1 Gene:nae1 / 573336 ZFINID:ZDB-GENE-040426-1552 Length:533 Species:Danio rerio


Alignment Length:535 Identity:105/535 - (19%)
Similarity:172/535 - (32%) Gaps:183/535 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 ESLYSRQLYVLGHDAMRRMANSDILLSGLGGLGLEIAKNVILGGVKSITLHDTATCGLHDLSSQF 261
            |..|.|||.:.|......:.|:.:.|......|.||.||::|.|:.:.|:.|.......|:.:.|
Zfish     9 EQRYDRQLRLWGDHGQEALENAHVCLINATASGTEILKNLVLPGIGAFTIVDGHKVSGEDVGNNF 73

  Fly   262 YLTEADIGKNRAEASCAQLAELNNYVRTVSHTGPLTE-----------EFLRKFRVVVLTNSDGE 315
            :|:.:.||||||:|:...|.|||:.|     :|...|           ||..:|.:|:.......
Zfish    74 FLSSSAIGKNRAQAATELLQELNSDV-----SGNFVEESPDKLLDNDCEFFHRFSLVIAVQLPES 133

  Fly   316 EQQRIAKFAHENGIALIIAETRGLFA--------------------------KVFCDFGESFTIY 354
            ....:.....|.|:..::..|.||..                          :.|.:.......|
Zfish   134 TCLGLGAVLWEAGVPFLVCRTYGLIGYMRLIVKEHTVVESHPDNALEDLRLDQPFTELKRHVESY 198

  Fly   355 DQD-------------------------------------------------------------- 357
            |.|                                                              
Zfish   199 DLDNMEKKDHSHTPWIIVVARYLEKWYNENNSQLPKNYKEKEAFRQLLREGILKNENGGLEDEEN 263

  Fly   358 --------GTQPISTMIASITHDAQGVVTCLDET---------RHGFNDGDYVTFSEVQGMQELN 405
                    .|....|.|:|.|.|......|.:.|         .||..|     |.:.:|    |
Zfish   264 FEEAIKNVNTALNPTKISSGTQDIFNAEQCENITSQSSSFWVMAHGVRD-----FVQNEG----N 319

  Fly   406 GCQPLKITVLGPYTFSIGDTSKF----GEYK------SGGVATQVKM--------PKTISFKPLA 452
            |..|::    |.....|.|:.||    ..|:      :..|:..|:|        |::||.:.:.
Zfish   320 GNLPVR----GSIPDMIADSDKFIKLQNVYRDKAMRDAAVVSKHVEMLLQSVGKTPESISEQEIK 380

  Fly   453 QATEEPEFL-------------ISDFAK------LDSP---ATLHVAFNALSCYRKAHNGALPRP 495
            ...:...||             :..|.|      :|||   ..|::...::..:.:.|: ..|..
Zfish   381 LFCKNAAFLRVVRCRSLADEYSVDTFNKDEITSCMDSPDSEMVLYLMLRSVDRFYQQHS-RYPGV 444

  Fly   496 WN---EEDANSFLEVVRA-----SSNAEVDEKLVLQFAKICSGNTCPLDAAVGGIVAQEVLKACS 552
            :|   |||.|.....|.:     |.|..|.:..:.:|.:..:.....:.|.:||..|||.:|..:
Zfish   445 YNYQVEEDINKLKLCVNSLLQEYSLNVNVKDDYIHEFCRYGAAEPHTVAAFLGGSAAQEAIKIIT 509

  Fly   553 GKFTPIYQWLYFDAL 567
            .:|.|......::|:
Zfish   510 HQFVPFNNTFLYNAM 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 105/535 (20%)
Ube1_repeat1 199..574 CDD:238768 104/533 (20%)
E1_4HB 447..510 CDD:292809 17/87 (20%)
Ube1_repeat2 606..1144 CDD:238767
nae1NP_956793.1 ThiF 6..>164 CDD:223552 43/159 (27%)
APPBP1_RUB 10..531 CDD:238770 104/534 (19%)
Interaction with uba3. /evidence=ECO:0000250 330..343 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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