DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and Uba2

DIOPT Version :10

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_057891.1 Gene:Uba2 / 50995 MGIID:1858313 Length:638 Species:Mus musculus


Alignment Length:636 Identity:164/636 - (25%)
Similarity:276/636 - (43%) Gaps:144/636 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 KKFQEKLADSKWFIVGAGAIGCELLKNFGMLGLGTGNGQIFVTDMDLIEKSNLNRQFLFRPHDVQ 660
            ::..|.::..:..:||||.||||||||..:    ||...|.:.|:|.|:.|||||||||:...|.
Mouse     9 RELAEAVSGGRVLVVGAGGIGCELLKNLVL----TGFSHIDLIDLDTIDVSNLNRQFLFQKKHVG 69

  Fly   661 KPKSMTAADAIKRMNPEVNVTAYELRVGAETEKVFSED----FFGKLDGVANALDNVDARIYMDR 721
            :.|:..|.:::.:.:|:.|:.|:.       :.:.:.|    ||.:...|.|||||..||.:::|
Mouse    70 RSKAQVAKESVLQFHPQANIEAHH-------DSIMNPDYNVEFFRQFILVMNALDNRAARNHVNR 127

  Fly   722 KCIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDA 786
            .|:...:||:|:||.|.||.|..|....||.|.....|.:::.|.||::|.|:...|.:.||:..
Mouse   128 MCLAADVPLIESGTAGYLGQVTTIKKGVTECYECHPKPTQRTFPGCTIRNTPSEPIHCIVWAKYL 192

  Fly   787 FEGVFKQSAENAAQYI----ADPQFTERIAKLPGIQPLEILDSIKKALIDDKPKSFAHCVEWARL 847
            |..:|.:  |:|.|.:    |||:        ...:|.| .::..:|..:|.........|||: 
Mouse   193 FNQLFGE--EDADQEVSPDRADPE--------AAWEPTE-AEARARASNEDGDIKRISTKEWAK- 245

  Fly   848 YWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKRCPDPLVFDVNDPMHLDFIYAAANLRAEVYG 912
                                   |:|                           |....|..:::.
Mouse   246 -----------------------STG---------------------------YDPVKLFTKLFK 260

  Fly   913 IEQVRNRETIAELVQKVKVPEFKPRSGVKIETNEAAAAASANNFDDGELDQDRVD-KIISELLKN 976
             :.:|...|:.:|.:|.|.|  .|....::::...|.|...|....|..||..:| |..:.|...
Mouse   261 -DDIRYLLTMDKLWRKRKPP--VPLDWAEVQSQGEANADQQNEPQLGLKDQQVLDVKSYASLFSK 322

  Fly   977 ADKSSKI--------TPLEFEKDDDSNLHMDFIVACSNLRAANYKIPPADRHKSKLIAGKIIPAI 1033
            :.::.::        ..|.::|||..  .|||:.:.:|||...:.:....|...|.:||.|||||
Mouse   323 SIETLRVHLAEKGDGAELIWDKDDPP--AMDFVTSAANLRMHIFSMNMKSRFDIKSMAGNIIPAI 385

  Fly  1034 ATTTSVLSGLAVLEVIKLIVGHRD------LVKFKNGFANLALP----------FMAFSEPLPAA 1082
            |||.:|::||.|||.:|::.|..|      |.|..|....|.:|          ::..|:|    
Mouse   386 ATTNAVIAGLIVLEGLKILSGKIDQCRTIFLNKQPNPRKKLLVPCALDPPNTNCYVCASKP---- 446

  Fly  1083 KNTYYGKEWTLWDRFEVTGELSLQE--FLNYFEENEKLKITMLSQGV-------SMLYSFFMPKA 1138
                           |||..|::.:  .|...::..|.|..|::..|       ::|.|  ..:.
Mouse   447 ---------------EVTVRLNVHKVTVLTLQDKIVKEKFAMVAPDVQIEDGKGTILIS--SEEG 494

  Fly  1139 KCSERLPLPMSEV-VRRVSKRRLEP--HERSLVFEICCNDVDGEDVEVPYV 1186
            :.....|..:|:. :|..|:.:.:.  .:.:|:..|..::..|:|||...|
Mouse   495 ETEANNPKKLSDFGIRNGSRLQADDFLQDYTLLINILHSEDLGKDVEFEVV 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 164/636 (26%)
Uba2NP_057891.1 Uba2_SUMO 19..442 CDD:238766 139/500 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 202..233 8/39 (21%)
UAE_UbL 450..536 CDD:464286 14/87 (16%)
UBA2_C 547..633 CDD:465058
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 548..638
Blue background indicates that the domain is not in the aligned region.

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