DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uba1 and uba5

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_001004790.1 Gene:uba5 / 448010 XenbaseID:XB-GENE-955661 Length:399 Species:Xenopus tropicalis


Alignment Length:429 Identity:94/429 - (21%)
Similarity:157/429 - (36%) Gaps:134/429 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 TEGVEEADAQPVGSRYDSQIAIFGKKF-----QEKLADSKWFIVGAGAIG---CELLKNFGMLGL 628
            |...|..|:.|    |...:|:  |:.     .||:......:||.|.:|   .|:|...|:   
 Frog    38 TMSAEVVDSNP----YSRLMAL--KRMGIVEDYEKIRTFTVAVVGVGGVGSVTAEMLTRCGI--- 93

  Fly   629 GTGNGQIFVTDMDLIEKSNLNRQFLFRPHDVQKPKSMTAADAIKRMNPEVNVTAYELRVGAETEK 693
                |::.:.|.|.:|.:|:||.| |:||.....|...|...::.:||:|....:...:......
 Frog    94 ----GKLLLFDYDKVEMANMNRLF-FQPHQAGLSKVEAAEHTLRNINPDVQFEVHNYNITTLDNF 153

  Fly   694 VFSEDFFGK--------LDGVANALDNVDARIYMDRKCIFNRIPLV--ETGTL--GTLGNVQVIV 746
            ....|...|        :|.|.:.:||.:||:.::..|  |.:..:  |:|..  ...|::|:|.
 Frog   154 QHFMDRISKGGLKEGTPVDLVLSCVDNFEARMAINTAC--NELVQIWMESGVSENAVSGHIQLIK 216

  Fly   747 PFATESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDAFEGVFKQSAENAAQYIADPQFTERI 811
            |..|..::.:  ||        |....|..|.||:     .|||.                   .
 Frog   217 PGETACFACA--PP--------LVVAANIDEKTLK-----REGVC-------------------A 247

  Fly   812 AKLP---GIQPLEILDSIKKALIDDKPKSFAHCVEWARLYWEDQYV--NQIKQLLFNFPPDQITS 871
            |.||   |:....::.::.|.|::....||              |:  |.::..   ||...:..
 Frog   248 ASLPTTMGVVAGMLVQNVLKYLLNFGTVSF--------------YLGYNAMQDF---FPTMAMKP 295

  Fly   872 SGQPFWSGPKRC----------------PDPLVFDVNDPMHLDFIYAAANLRAEVYGIE---QVR 917
            :.|   .|.|.|                .:|:|....:.:|.|          ..:|||   :|.
 Frog   296 NPQ---CGDKYCRKQQEEFKLKEAARPKQEPIVVKEEEIVHED----------NDWGIELVSEVS 347

  Fly   918 NRE------TIAELVQKVK----VPEFKPRSGVKIETNE 946
            ..|      .:.||.:.:|    ||..:|.||..:|.:|
 Frog   348 EEELKAASGPVPELPEGIKVAYTVPITEPTSGFIVEDSE 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 94/429 (22%)
Ube1_repeat1 199..574 CDD:238768 1/1 (100%)
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 85/390 (22%)
uba5NP_001004790.1 ThiF_MoeB_HesA_family 48..293 CDD:238386 68/311 (22%)
UFM1-interacting sequence (UIS). /evidence=ECO:0000250|UniProtKB:Q9GZZ9 331..343 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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