DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and Uba2

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_524756.2 Gene:Uba2 / 44496 FlyBaseID:FBgn0029113 Length:700 Species:Drosophila melanogaster


Alignment Length:477 Identity:142/477 - (29%)
Similarity:219/477 - (45%) Gaps:81/477 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   593 IFGKKFQEKLADSKWFIVGAGAIGCELLKNFGMLGLGTGNGQIFVTDMDLIEKSNLNRQFLFRPH 657
            :|....||.:..||..:||||.||||:|||..:    :|...|.:.|:|.|:.|||||||||...
  Fly     8 VFPPTLQELVKKSKVLVVGAGGIGCEVLKNLVL----SGFTDIEIIDLDTIDLSNLNRQFLFHRE 68

  Fly   658 DVQKPKSMTAADAIKRMNPEVNVTAYELRVGAETEKVFSEDFFGKLDGVANALDNVDARIYMDRK 722
            .|.|.|:..|.::....||:..:|||...|   |...:..:||.|.|.|.:||||..||.:::|.
  Fly    69 HVGKSKARVARESALSFNPDAKITAYHDSV---TSTDYGVNFFKKFDLVLSALDNRAARNHVNRM 130

  Fly   723 CIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDAF 787
            |:...:||:|:||.|..|.|::|....|:.|..:....::|.|.||::|.|:...|.:.||:..|
  Fly   131 CLNADVPLIESGTAGYNGQVELIKRGLTQCYECTPKDKQRSFPGCTIRNTPSEPIHCIVWAKHLF 195

  Fly   788 EGVFKQSA--ENAAQYIADPQFTERIA-------KLPGIQPLEILDSIKKALIDDKPKSF--AHC 841
            ..:|.:|.  |:.:...|||...|:..       |..|.:..|.....|:|..|....:.  .:.
  Fly   196 NQLFGESLEDEDISPDAADPDAKEKDGGDGNGEPKGDGKEKGEESKEEKEAKEDTANGNIMRINT 260

  Fly   842 VEWARLYWEDQYVNQIKQLLFN-FPPDQIT-----SSGQPFWSGPKRCPDPLVFDVNDPMHLDFI 900
            .:||:      ..|.....||| |..:.||     |:   .|. .::.|.|:.:|          
  Fly   261 RQWAK------DCNYDAGKLFNKFFNEDITYLLRMSN---LWK-TRKAPVPVQWD---------- 305

  Fly   901 YAAANLRAEVYGIEQVRNRETIAELVQKVKVPEFKPRSGVKIETNEAAAAASANNFDDGELDQDR 965
                .|..|....:|    :.:|             :...|:.:.|..|...||:          
  Fly   306 ----TLLPEGSSGDQ----KDVA-------------KQHHKVWSIEECAQVFANS---------- 339

  Fly   966 VDKIISELLKNADKSSKITPLEFEKDDDSNLHMDFIVACSNLRAANYKIPPADRHKSKLIAGKII 1030
                :.||..|..|......|.::|||..  .|||:.||:|:|:..:.|....|.:.|.:||.||
  Fly   340 ----LKELSANFLKLEGDDTLAWDKDDQP--AMDFVAACANVRSHIFDIERKSRFEIKSMAGNII 398

  Fly  1031 PAIATTTSVLSGLAVLEVIKLI 1052
            ||||||.::.:|::|:...|::
  Fly   399 PAIATTNAITAGISVMRAFKVL 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 142/477 (30%)
Ube1_repeat1 199..574 CDD:238768
E1_4HB 447..510 CDD:292809
Ube1_repeat2 606..1144 CDD:238767 138/464 (30%)
Uba2NP_524756.2 ThiF 7..>177 CDD:279270 68/175 (39%)
Uba2_SUMO 21..459 CDD:238766 138/464 (30%)
UAE_UbL 467..552 CDD:291402
UBA2_C 573..691 CDD:292812
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446855
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0476
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10953
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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