DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and Uba7

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_001380849.1 Gene:Uba7 / 301000 RGDID:1308323 Length:990 Species:Rattus norvegicus


Alignment Length:1016 Identity:412/1016 - (40%)
Similarity:604/1016 - (59%) Gaps:46/1016 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 IDESLYSRQLYVLGHDAMRRMANSDILLSGLGGLGLEIAKNVILGGVKSITLHDT-ATCGLHDLS 258
            :||.||||||||||..||:|:..:.:||.||.|||.|:|||::|.||.|:||||. .||.. ||:
  Rat     1 MDEELYSRQLYVLGLPAMQRIREAKVLLCGLQGLGAEVAKNLVLMGVGSLTLHDPHPTCWA-DLA 64

  Fly   259 SQFYLTEADIGKNRAEASCAQLAELNNYVRTVSHTGPLTEEFLRKFRVVVLTNSDGEEQQRIAKF 323
            :||:|:|..:|::|||||..|||:||..|:...|.|.:||:.:|.|:|||||:|..|:|..:...
  Rat    65 AQFFLSEESLGRSRAEASQPQLAQLNEAVQISVHRGDITEDLVRGFQVVVLTDSKLEDQLNMGAL 129

  Fly   324 AHENGIALIIAETRGLFAKVFCDFGESFTIYDQDGTQPISTMIASITHDAQGVVTCL-DETRHGF 387
            .|:|.:..::||||||..::||||||.||:.|....:|.|..|..|:..:.|:||.. ...|..|
  Rat   130 CHKNRVYFLMAETRGLVGRLFCDFGEDFTVVDPTEVEPTSAAIQDISQGSPGIVTLRGGSKRPSF 194

  Fly   388 NDGDYVTFSEVQGMQELNGCQPLKITVLGPYTFSIGDTSKFGEYKSGGVATQVKMPKTISFKPLA 452
            .|||.|.||:::||.|||...|..:.|....:..||||:.|..|..|||.|:||.|||:..|||.
  Rat   195 YDGDLVMFSDIEGMVELNSHSPQPVRVQKDGSLEIGDTTTFSRYLRGGVVTEVKRPKTVKHKPLD 259

  Fly   453 QATEEPEFLISDFAKLDSPATLHVAFNALSCYRKAHNGALPRPWNEEDANSF------LEVVRAS 511
            .|..:|..::.:..::.....||..|:||..:::.| |.||:||:.:||.:.      ||.::.:
  Rat   260 IALLQPCMVVQNTQEIQRAHCLHQTFHALHKFQQLH-GRLPKPWDPDDAETVVWLAQDLEPLKGA 323

  Fly   512 SNAEVDEKLVLQFAKICSGNTCPLDAAVGGIVAQEVLKACSGKFTPIYQWLYFDALECLPTEGV- 575
            ....:||.|:...|...:|:..|:.|.:||:.|||||||.||||.|:.||||||||||||.:.. 
  Rat   324 KEESLDEALLRTIALSSAGSLSPMAAILGGVAAQEVLKAVSGKFMPLDQWLYFDALECLPEDETL 388

  Fly   576 --EEADAQPVGSRYDSQIAIFGKKFQEKLADSKWFI-VGAGAIGCELLKNFGMLGLGT-GNGQIF 636
              ...|..|...|||.|||:||..|||||:...:.: |||||||||:||.|.::|||. .||.:.
  Rat   389 LPSPEDCHPRNCRYDGQIAVFGTGFQEKLSYKHYLLQVGAGAIGCEMLKGFALVGLGVRDNGGVT 453

  Fly   637 VTDMDLIEKSNLNRQFLFRPHDVQKPKSMTAADAIKRMNPEVNVTAYELRVGAETEKVFSEDFFG 701
            :.|||.:|:|||:|||||||.|..:||:..||:|..|:||::.||::...:...||.::.:|||.
  Rat   454 IADMDHVERSNLSRQFLFRPKDTGRPKAEVAAEAAHRLNPDLQVTSHTCPLDPTTEDIYDDDFFS 518

  Fly   702 KLDGVANALDNVDARIYMDRKCIFNRIPLVETGTLGTLGNVQVIVPFATESYSSSQDPPEKSIPI 766
            ::|||..|||:..||.|:..:|.....||:|.||.||.|:..|.||:.||.|.......|...|:
  Rat   519 RVDGVVAALDSFQARHYVAARCTHYLKPLLEAGTQGTRGSASVFVPYVTEVYKGPTSAEEAPYPV 583

  Fly   767 CTLKNFPNAIEHTLQWARDAFEGVFKQSAENAAQYIADPQFTERIAKLPGIQPLEILDSIKKALI 831
            |||::||:.:||:||||:|.|||:|:.|||....|  ....|..:....|...|.:|..: ..::
  Rat   584 CTLRHFPSTVEHSLQWAQDEFEGLFRLSAETINDY--QQTCTSSLLGTDGTGILALLQQV-MGVL 645

  Fly   832 DDKPKSFAHCVEWARLYWEDQYVNQIKQLLFNFPPDQITSSGQPFWSGPKRCPDPLVFDVNDPMH 896
            ..:|:::..||.||..:|:..:.:.|.:||..||.|::...|..||||.|:||.||.||.|...|
  Rat   646 RTRPQTWQDCVVWALGHWQLCFRDNIVELLRKFPSDKVLEDGTLFWSGSKKCPHPLQFDPNQDTH 710

  Fly   897 LDFIYAAANLRAEVYGIEQVRNRETIAEL--VQKVKVPEFKPRSGVKIETNEAAAAASANNFDDG 959
            ..::.|||||.|.::|:...:::..:.||  :..::.|:..|:                 |....
  Rat   711 FLYVLAAANLYARMHGLPGSQSQTALRELLTLTLLQEPDSMPQ-----------------NLFSA 758

  Fly   960 ELDQDRVDKIISELLKNADKSSKITPLEFEKDDDSNLHMDFIVACSNLRAANYKIPPADRHKSKL 1024
            |..|::: |.:.|.|.:.:|...:.|:.|.|||.||.|.||:||.::||..||.|.|.:|.:.|.
  Rat   759 EFGQEQL-KELQETLDDWNKGPPLKPVLFGKDDSSNFHEDFVVAATDLRCQNYGILPVNRARIKQ 822

  Fly  1025 IAGKIIPAIATTTSVLSGLAVLEVIKLIVGHRDLVKFKNGFANLALPFMAFSEPLPAAKNTYYGK 1089
            ..|:|||||||:|:|::||..||:.|::.|.|.|..|::.:.:||......|.|...|..:::..
  Rat   823 TIGRIIPAIATSTAVVAGLLGLELYKVVSGPRPLGTFRHSYLHLAENHFIRSAPSAPAMQSFHHL 887

  Fly  1090 EWTLWDRFEVTG---ELSLQEFLNYFEENEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEV 1151
            |||.|.|..|..   |.:|:..|.:.:|...|.:.||....::|||...|..|.::.|.|.::|:
  Rat   888 EWTCWHRLTVPAGQPERTLESLLAHLQEEHGLTVRMLLHDQALLYSSGWPFEKQAQHLGLRVTEL 952

  Fly  1152 VRRVSKRRLEPHERSLVFEICCNDVDGEDVEV--PYVRYTL 1190
            |::|:.::.:|..|.||||:.|   :|||.|:  |.:.|.|
  Rat   953 VQQVTGQKPKPGLRVLVFELSC---EGEDDEMAFPPLHYEL 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 410/1012 (41%)
Ube1_repeat1 199..574 CDD:238768 173/382 (45%)
E1_4HB 447..510 CDD:292809 20/68 (29%)
Ube1_repeat2 606..1144 CDD:238767 203/544 (37%)
Uba7NP_001380849.1 Ube1 1..988 CDD:273603 410/1012 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54221
OrthoDB 1 1.010 - - D139631at33208
OrthoFinder 1 1.000 - - FOG0001106
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100444
Panther 1 1.100 - - LDO PTHR10953
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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