DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uba1 and ptr3

DIOPT Version :9

Sequence 1:NP_477310.2 Gene:Uba1 / 35998 FlyBaseID:FBgn0023143 Length:1191 Species:Drosophila melanogaster
Sequence 2:NP_001342779.1 Gene:ptr3 / 2540744 PomBaseID:SPBC1604.21c Length:1012 Species:Schizosaccharomyces pombe


Alignment Length:1047 Identity:527/1047 - (50%)
Similarity:707/1047 - (67%) Gaps:57/1047 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 NSNNNVSSSNNNSNNSTNNRQLEGSSNMAGNSAAAGGDIDESLYSRQLYVLGHDAMRRMANSDIL 221
            ::|.|:..::.|:                         |||.|||||||||||:||::|:.|::|
pombe     2 SNNMNIDQTDQNT-------------------------IDEGLYSRQLYVLGHEAMKQMSQSNVL 41

  Fly   222 LSGLGGLGLEIAKNVILGGVKSITLHDTATCGLHDLSSQFYLTEADIGKNRAEASCAQLAELNNY 286
            :.|..|||:||||||.|.||||:||:|.....:.|||||::|||.|||..||:.:.::|||||.|
pombe    42 IIGCKGLGVEIAKNVCLAGVKSVTLYDPQPTRIEDLSSQYFLTEDDIGVPRAKVTVSKLAELNQY 106

  Fly   287 VRTVSHTGPLTEEFLRKFRVVVLTNSDGEEQQRIAKFAHENGIALIIAETRGLFAKVFCDFGESF 351
            | .||....|:.|:|:.|:.||:|.:...:|..|..|.|:|.||.|.|::||||..:||||||:|
pombe   107 V-PVSVVDELSTEYLKNFKCVVVTETSLTKQLEINDFTHKNHIAYIAADSRGLFGSIFCDFGENF 170

  Fly   352 TIYDQDGTQPISTMIASITHDAQGVVTCLDETRHGFNDGDYVTFSEVQGMQELNGCQPLKITVLG 416
            ...|.||.:|::.||||||.|  ||||.|:|||||..:||:|.|:||:||..||...|.|:.|.|
pombe   171 ICTDTDGNEPLTGMIASITDD--GVVTMLEETRHGLENGDFVKFTEVKGMPGLNDGTPRKVEVKG 233

  Fly   417 PYTFSIGDTSKFGEYKSGGVATQVKMPKTISFKPLAQATEEPEFLISDFAKLDSPATLHVAFNAL 481
            |||||||.....|.....||.||||:|..||||.|.::.::||::..||.|:..|...|:||.||
pombe   234 PYTFSIGSVKDLGSAGYNGVFTQVKVPTKISFKSLRESLKDPEYVYPDFGKMMRPPQYHIAFQAL 298

  Fly   482 SCYRKAHNGALPRPWNEEDANSFLEVVR--ASS---NAEVDEKLVLQFAKICSGNTCPLDAAVGG 541
            |.:..||.|:||||.|:.||..|.|..:  ||:   :.|:||||:.:.:....|:...:.|.:||
pombe   299 SAFADAHEGSLPRPRNDIDAAEFFEFCKKIASTLQFDVELDEKLIKEISYQARGDLVAMSAFLGG 363

  Fly   542 IVAQEVLKACSGKFTPIYQWLYFDALECLPTE-GVEEADAQPVGSRYDSQIAIFGKKFQEKLADS 605
            .||||||||.:.||.|:.|:.|||:||.||:. .:.|...:|.|.|||.|||:||.:||||:|..
pombe   364 AVAQEVLKATTSKFYPLKQYFYFDSLESLPSSVTISEETCKPRGCRYDGQIAVFGSEFQEKIASL 428

  Fly   606 KWFIVGAGAIGCELLKNFGMLGLGTG-NGQIFVTDMDLIEKSNLNRQFLFRPHDVQKPKSMTAAD 669
            ..|:|||||||||:|||:.|:|:.|| :|.|.|||||.||||||||||||||.||.|.||..|:.
pombe   429 STFLVGAGAIGCEMLKNWAMMGVATGESGHISVTDMDSIEKSNLNRQFLFRPRDVGKLKSECAST 493

  Fly   670 AIKRMNPEV--NVTAYELRVGAETEKVFSEDFFGKLDGVANALDNVDARIYMDRKCIFNRIPLVE 732
            |:..|||.:  .:|:|:.|||.|:|.:|.::||.||..|.||||||:||:|:||:|:|...||:|
pombe   494 AVSIMNPSLTGKITSYQERVGPESEGIFGDEFFEKLSLVTNALDNVEARMYVDRRCVFFEKPLLE 558

  Fly   733 TGTLGTLGNVQVIVPFATESYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDAFEGVFKQSAEN 797
            :|||||.||.||:||..||||.|||||||||.||||||||||.||||:.||||.|||:|||..:|
pombe   559 SGTLGTKGNTQVVVPHLTESYGSSQDPPEKSFPICTLKNFPNRIEHTIAWARDLFEGLFKQPIDN 623

  Fly   798 AAQYIADPQFTERIAKLPGIQPLEILDSIKKALIDDKPKSFAHCVEWARLYWEDQYVNQIKQLLF 862
            ...|::.|.|.|...|... .|.|:|::|:..|:.:||.||..|:.||||.::..:.|.|:||||
pombe   624 VNMYLSSPNFLETSLKTSS-NPREVLENIRDYLVTEKPLSFEECIMWARLQFDKFFNNNIQQLLF 687

  Fly   863 NFPPDQITSSGQPFWSGPKRCPDPLVFDVNDPMHLDFIYAAANLRAEVYGIEQVRNRETIAELVQ 927
            |||.|.:||:||||||||||.|.||.||:::..|.|||.|||:|.|..||::.    ||...:.:
pombe   688 NFPKDSVTSTGQPFWSGPKRAPTPLSFDIHNREHFDFIVAAASLYAFNYGLKS----ETDPAIYE 748

  Fly   928 KV----KVPEFKPRSGVKIETNE-AAAAASANNFDDGELDQDRVDKIISELLKNADK--SSKITP 985
            :|    ..|.|.|:||:||:.|| ..|..:|.|.|..||      |.|::.|.....  ..::||
pombe   749 RVLAGYNPPPFAPKSGIKIQVNENEEAPETAANKDKQEL------KSIADSLPPPSSLVGFRLTP 807

  Fly   986 LEFEKDDDSNLHMDFIVACSNLRAANYKIPPADRHKSKLIAGKIIPAIATTTSVLSGLAVLEVIK 1050
            .|||||||||.|:|||.|.|||||.||.|.||||.|:|.:||||:||:.|:|:|:|||..||::|
pombe   808 AEFEKDDDSNHHIDFITAASNLRAMNYDITPADRFKTKFVAGKIVPAMCTSTAVVSGLVCLELVK 872

  Fly  1051 LIVGHRDLVKFKNGFANLALPFMAFSEPLPAAKNTYYGKEW-TLWDRFEVTGELSLQEFLNYFEE 1114
            |:.|.:.:.::||||.|||:....||:|:.:.|....|||. .:|||:.:. :.:|||.::||::
pombe   873 LVDGKKKIEEYKNGFFNLAIGLFTFSDPIASPKMKVNGKEIDKIWDRYNLP-DCTLQELIDYFQK 936

  Fly  1115 NEKLKITMLSQGVSMLYSFFMPKAKCSERLPLPMSEVVRRVSKRRLEPHERSLVFEICCNDVDGE 1179
            .|.|::||||.|||:||:.|.|..|.:|||||.:||:|.:::|::|||..:.||.||||:|.:||
pombe   937 EEGLEVTMLSSGVSLLYANFQPPKKLAERLPLKISELVEQITKKKLEPFRKHLVLEICCDDANGE 1001

  Fly  1180 DVEVPYV 1186
            |||||::
pombe  1002 DVEVPFI 1008

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uba1NP_477310.2 Ube1 194..1188 CDD:273603 524/1010 (52%)
Ube1_repeat1 199..574 CDD:238768 192/380 (51%)
E1_4HB 447..510 CDD:292809 28/64 (44%)
Ube1_repeat2 606..1144 CDD:238767 288/548 (53%)
ptr3NP_001342779.1 Ube1 14..1011 CDD:273603 524/1035 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 529 1.000 Domainoid score I44
eggNOG 1 0.900 - - E1_COG0476
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22002
Inparanoid 1 1.050 993 1.000 Inparanoid score I37
OMA 1 1.010 - - QHG54221
OrthoFinder 1 1.000 - - FOG0001106
OrthoInspector 1 1.000 - - oto100668
orthoMCL 1 0.900 - - OOG6_100444
Panther 1 1.100 - - LDO PTHR10953
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1577
SonicParanoid 1 1.000 - - X1782
TreeFam 1 0.960 - -
1413.860

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