DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Prg4

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_067375.3 Gene:Prg4 / 96875 MGIID:1891344 Length:1221 Species:Mus musculus


Alignment Length:396 Identity:75/396 - (18%)
Similarity:124/396 - (31%) Gaps:150/396 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 PYKPQTTTTTTTTTTMRA--MIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQ 371
            |.||:.|||:..|||::|  :..:...||                                    
Mouse   777 PKKPEPTTTSPKTTTLKATTLAPKVTAPA------------------------------------ 805

  Fly   372 EEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEM 436
                           ||.|.:.||.....::..:           |:....|.|....|:..::.
Mouse   806 ---------------EEIQNKPEETTPASEDSDD-----------SKTTLKPQKPTKAPKPTKKP 844

  Fly   437 ERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQ 501
            .:..::....::.:..:  .|:.:.....|:         ....||..||||.....|..|:.:|
Mouse   845 TKAPKKPTSTKKPKTPK--TRKPKTTPSPLK---------TTSATPELNTTPLEVMLPTTTIPKQ 898

  Fly   502 HHHHNKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLYNG----YPTEIRRHWSALP 562
                    .|.|::.....|......||            |...|..|    :||       |:|
Mouse   899 --------TPNPETAEVNPDHEDADGGE------------GEKPLIPGPPVLFPT-------AIP 936

  Fly   563 ENLTKVDAVYENKQRQIVFFIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRT 627
            .  |.:.|...|:...|...:..|..:.|.        ||:..|                    |
Mouse   937 G--TDLLAGRLNQGININPMLSDETNLCNG--------KPVDGL--------------------T 971

  Fly   628 YMTSGTL-------YWRIDDYTGQVELDYPRDMS-IWSGVGYNIDAAFQ--YLDGKTYFFKNLGY 682
            .:.:|||       :|.::.:...   ..||.:: :| |:...||..|.  ..:|||:|||:..|
Mouse   972 TLRNGTLVAFRGHYFWMLNPFRPP---SPPRRITEVW-GIPSPIDTVFTRCNCEGKTFFFKDSQY 1032

  Fly   683 WEFNDD 688
            |.|.:|
Mouse  1033 WRFTND 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223
Peptidase_M10 143..301 CDD:425668
HX 513..707 CDD:238046 42/190 (22%)
Prg4NP_067375.3 SO 26..68 CDD:197571
Somatomedin_B 69..106 CDD:460034
PHA03247 <446..761 CDD:223021
PTZ00449 <634..938 CDD:185628 44/262 (17%)
HX 959..1220 CDD:238046 26/112 (23%)
Blue background indicates that the domain is not in the aligned region.

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