DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and AT2G45040

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_182030.1 Gene:AT2G45040 / 819111 AraportID:AT2G45040 Length:342 Species:Arabidopsis thaliana


Alignment Length:321 Identity:99/321 - (30%)
Similarity:147/321 - (45%) Gaps:44/321 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EGSHSTAATRSKKAKTAISEDIMYNYLMQFDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVT 92
            |..:.:..|.:.....:|.|  :..:|.|:.|||::. |:..:..|..|   :|..::.| :.:|
plant    33 EARNPSQFTTNPSPDVSIPE--IKRHLQQYGYLPQNK-ESDDVSFEQAL---VRYQKNLG-LPIT 90

  Fly    93 GEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFALQG-PKWSR---TDLTWSM 153
            |:.||.|...|..||||.     .|...|.......|.    :.....| |:|:|   ..||::.
plant    91 GKPDSDTLSQILLPRCGF-----PDDVEPKTAPFHTGK----KYVYFPGRPRWTRDVPLKLTYAF 146

  Fly   154 VNRSMPD---ASKVERMVQTALDVWANHSKLTFREVYSDQ--ADIQILFARRAHGDGYKFDGPGQ 213
            ...::..   .:.:.|:.:.|...||:...::|.|. .|.  |||:|.|....||||..|||...
plant   147 SQENLTPYLAPTDIRRVFRRAFGKWASVIPVSFIET-EDYVIADIKIGFFNGDHGDGEPFDGVLG 210

  Fly   214 VLAHAFYPGEGRGGDAHFDADETW--NFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMF 276
            ||||.|.|..||   .|.|..|||  :|| |...|...:..:||:||:||.|||.||::.||.|:
plant   211 VLAHTFSPENGR---LHLDKAETWAVDFD-EEKSSVAVDLESVAVHEIGHVLGLGHSSVKDAAMY 271

  Fly   277 PWYQNNEVAGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTM--------RAMIY 329
            |..:......||..||..|:|.||||...    :...:...:.|:|.:        :.|||
plant   272 PTLKPRSKKVNLNMDDVVGVQSLYGTNPN----FTLNSLLASETSTNLADGSRIRSQGMIY 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 15/50 (30%)
Peptidase_M10 143..301 CDD:425668 62/167 (37%)
HX 513..707 CDD:238046
AT2G45040NP_182030.1 PG_binding_1 45..101 CDD:460223 17/62 (27%)
Peptidase_M10 133..296 CDD:425668 62/167 (37%)
Blue background indicates that the domain is not in the aligned region.

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