DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Bsph2

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001074411.1 Gene:Bsph2 / 77684 MGIID:1924934 Length:131 Species:Mus musculus


Alignment Length:92 Identity:21/92 - (22%)
Similarity:31/92 - (33%) Gaps:39/92 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   495 YPTVHRQHHHHNKPRKPKPDSCMTY---YDAISIIRGELFIFRGPYLWRIGTSG----------- 545
            :|.|:....|:         ||::.   ||..|:.    |.|:|  .||..|:.           
Mouse    42 FPFVYADGFHY---------SCISLHSDYDWCSLD----FQFQG--RWRYCTAQDPPKCIFPFQF 91

  Fly   546 --------LYNGYPTEIRRHWSALPEN 564
                    ...||  .:.|.|.:|.||
Mouse    92 KQKLIKKCTKEGY--ILNRSWCSLTEN 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824
ZnMc_MMP 143..301 CDD:239805
HX 513..707 CDD:238046 18/74 (24%)
Bsph2NP_001074411.1 FN2 40..77 CDD:299134 13/49 (27%)
fn2 85..126 CDD:278469 7/34 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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