DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and hpxb

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_005173505.1 Gene:hpxb / 767787 ZFINID:ZDB-GENE-060929-800 Length:435 Species:Danio rerio


Alignment Length:260 Identity:58/260 - (22%)
Similarity:90/260 - (34%) Gaps:85/260 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   501 QHHHHNKPRKPKPDSCM-TYYDAIS-IIRGELFIFRGPYLWR--IGTSGLYNGYPTEIRRHWSAL 561
            :.||.        |.|. ..:|||: ..:|..|.|:|..||:  .|.|.|.:...||:..:    
Zfish    33 EDHHE--------DRCKGIEFDAIAPDEKGNTFFFKGDRLWKGLTGASVLSSSVFTELDDY---- 85

  Fly   562 PENLTKVDAVYE-------NKQRQIVFFIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDA-- 617
             .:|..|||.:.       :....|.||:..:.:.:.:..|..|:|..:.. ..|...:|:||  
Zfish    86 -AHLGHVDAAFRMHHEHDASSHDHIYFFLDDKVFSYYNYTLEKGYPMEIQQ-EFPGVPSHLDAAV 148

  Fly   618 ---------------------SF----------VWGH-NNRT---------YMTSGTLYWRIDDY 641
                                 ||          ||.| .|.|         |...|..:.|....
Zfish   149 ECPKGECITDSVLFFKGNEAYSFDIKTKSVKKKVWTHLPNCTSAFRWLEHYYCFHGHNFTRFHPV 213

  Fly   642 TGQVELDYPRD-----MSIWSGVGY------------NIDAAFQYLDGKTYFFKNLGYWEFNDDR 689
            ||:|..:||:|     |....|.|:            .:||......|:.|.|:::.|...:..|
Zfish   214 TGEVTGNYPKDARNYFMRCGEGFGHGGGARKLRCSEVKLDAISADERGRMYAFQDVMYVRLDTHR 278

  Fly   690  689
            Zfish   279  278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223
Peptidase_M10 143..301 CDD:425668
HX 513..707 CDD:238046 56/248 (23%)
hpxbXP_005173505.1 HX 38..232 CDD:238046 47/199 (24%)
HX 246..433 CDD:413329 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.

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