DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Hpx

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_445770.1 Gene:Hpx / 58917 RGDID:62040 Length:460 Species:Rattus norvegicus


Alignment Length:358 Identity:89/358 - (24%)
Similarity:134/358 - (37%) Gaps:104/358 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   395 ERWRQEQERQEEENRRRK----IEHKSQWERNPSKERN-RPRERQE------------MERRRQE 442
            |||:......:...|...    |:....|...|.|:.| .|:..||            :|..|.|
  Rat    88 ERWKNPVTSVDAAFRGPDSVFLIKEDKVWVYPPEKKENGYPKLFQEESPGIPYPPDAAVECHRGE 152

  Fly   443 QERQ-----EQERQEQED--RRRERERD--------RQLEWERR------NRNGAREPVTPTANT 486
            .:.:     :..|:...|  .|.::||.        ..|.|..|      |:.....||  |...
  Rat   153 CQSEGVLFFQGNRKWFWDFATRTQKERSWPAVGNCTAALRWLERYYCFQGNKFLRFNPV--TGEV 215

  Fly   487 TPRPTNKPYPTVHRQH------HHHNKPRK---------PKPDSCMTYYDAISII---RGELFIF 533
            .||     ||...|.:      ..|.|.|.         |....|.......:::   ||..:.|
  Rat   216 PPR-----YPLDARDYFISCPGRGHGKLRNGTAHGNSTHPMHSRCNADPGLSALLSDHRGATYAF 275

  Fly   534 RGPYLWRIGTS--GLYNGYPTEIRRHWSALPENLTKVDAVYENKQRQIVFFI-GREYYVF----- 590
            .|.:.||:.:|  | ::.:|  |..||   |:..:.|||.:...::  |:.| |.:.|||     
  Rat   276 SGSHYWRLDSSRDG-WHSWP--IAHHW---PQGPSAVDAAFSWDEK--VYLIQGTQVYVFLTKGG 332

  Fly   591 NSVMLAPGFPKPL-ASLGLPP--TLTHIDASFVWGHNNRTYMTSGTLYWRIDDYTGQ----VELD 648
            |:  |..|:||.| ..||.||  :|..|||:|....:::.|:|||...|.:|..:|.    .||.
  Rat   333 NN--LVSGYPKRLEKELGSPPGISLDTIDAAFSCPGSSKLYVTSGRRLWWLDLKSGAQATWAELS 395

  Fly   649 YPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLG 681
            :|.:.                :||.....|:||
  Rat   396 WPHEK----------------VDGALCLEKSLG 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223
Peptidase_M10 143..301 CDD:425668
HX 513..707 CDD:238046 53/187 (28%)
HpxNP_445770.1 HX 52..230 CDD:238046 32/148 (22%)
Hemopexin 1 53..93 3/4 (75%)
Hemopexin 2 94..138 9/43 (21%)
Hemopexin 3 139..183 8/43 (19%)
Hemopexin 4 184..230 12/52 (23%)
Hemopexin 5 257..302 13/50 (26%)
HX 269..458 CDD:238046 52/170 (31%)
Hemopexin 6 303..350 17/50 (34%)
Hemopexin 7 355..394 12/38 (32%)
Hemopexin 8 398..448 5/31 (16%)
Blue background indicates that the domain is not in the aligned region.

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