DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Mmp19

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_067387.1 Gene:Mmp19 / 58223 MGIID:1927899 Length:527 Species:Mus musculus


Alignment Length:709 Identity:172/709 - (24%)
Similarity:256/709 - (36%) Gaps:244/709 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TRSKKAKTAISEDIMYNYLMQFDYLPKSDLETGA--LRTEDQLKEAIRSLQSFGNITVTGEIDSA 98
            |.|.:|.....::.:.:||:|:.||.| .|| ||  .|.|| :.||:|:.|....:.::|::|.|
Mouse    15 TVSGRALGPTEKEAVLDYLLQYGYLQK-PLE-GADDFRLED-ITEALRTFQEASGLPISGQMDDA 76

  Fly    99 TARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFALQGPKWSRTDLTWSMVN----RSMP 159
            |...:::||||:     .|.|:..:|           ::.|.| .|.:.:||:.:.|    .|:|
Mouse    77 TRARMKQPRCGL-----EDPFNQKSL-----------KYLLLG-HWRKKNLTFRIFNVPSTLSLP 124

  Fly   160 DASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAHGD-----GYKFDGPGQVLAHAF 219
               :|...:..|...|::.:.||||||.:..|||::.|    ||.     ...|||||:|||||.
Mouse   125 ---RVRAALHQAFKYWSSVAPLTFREVKAGWADIRLSF----HGRQSLYCSNTFDGPGKVLAHAD 182

  Fly   220 YPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEV 284
            .|   ..|..|||.||.|.    .....|.|...:|.||:||:|||.||....|:|.|.|...:.
Mouse   183 IP---ELGSIHFDKDELWT----EGTYQGVNLRIIAAHEVGHALGLGHSRYTQALMAPVYAGYQP 240

  Fly   285 AGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNND 349
            ...|..||..|||.|||                                                
Mouse   241 FFKLHPDDVAGIQALYG------------------------------------------------ 257

  Fly   350 RNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIE 414
                               :|..|.|..:||.....|                            
Mouse   258 -------------------KRSPETRDEEEETEMLTV---------------------------- 275

  Fly   415 HKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREP 479
                                                                           .|
Mouse   276 ---------------------------------------------------------------SP 277

  Fly   480 VTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSCMTYYDAISI-IRGELFIFRGPYLWRIGT 543
            ||.                        || .|.|:.|....||:.: .||:.:.|:|.|:|.:..
Mouse   278 VTA------------------------KP-GPMPNPCSGEVDAMVLGPRGKTYAFKGDYVWTVTD 317

  Fly   544 SGLYNGYPTEIRRHWSALPENLTKVDAVYENKQRQIVFFIGREYYVFNSVMLAPGFPKPLASLGL 608
            ||  .|...:|...|..||.||..  |||..:.|:..||.|.:.:.:....::||||.....  :
Mouse   318 SG--PGPLFQISALWEGLPGNLDA--AVYSPRTRRTHFFKGNKVWRYVDFKMSPGFPMKFNR--V 376

  Fly   609 PPTLTHIDASFVWGHNNRTYMTSGTLYWRIDDYTGQVELDYPRDM-SIWSGVGYNIDAAFQYLDG 672
            .|.|   ||:..|..|.:.::..|:.||:.|:........||:.: .:::||.....||..:.||
Mouse   377 EPNL---DAALYWPVNQKVFLFKGSGYWQWDELARTDLSRYPKPIKELFTGVPDRPSAAMSWQDG 438

  Fly   673 KTYFFKNLGYWEFNDDRMKVAHARAKLSARRWMQCARSANEVDDEQRWTASLVSEGEET 731
            :.||||...||..| .:::||....: :...||.|   .::..|....|..:.....:|
Mouse   439 QVYFFKGKEYWRLN-QQLRVAKGYPR-NTTHWMHC---GSQTPDTNSSTGDVTPSTTDT 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 62/166 (37%)
ZnMc_MMP 143..301 CDD:239805 62/166 (37%)
HX 513..707 CDD:238046 59/195 (30%)
Mmp19NP_067387.1 PG_binding_1 32..81 CDD:279773 21/51 (41%)
Cysteine switch. /evidence=ECO:0000250 84..91 4/11 (36%)
Peptidase_M10 104..257 CDD:278824 62/166 (37%)
ZnMc_MMP 105..257 CDD:239805 62/165 (38%)
HX 286..471 CDD:238046 59/195 (30%)
Hemopexin 1 286..333 15/48 (31%)
Hemopexin 2 334..372 14/39 (36%)
Hemopexin 3 377..425 12/50 (24%)
Hemopexin 4 426..471 15/46 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 473..500 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10201
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X44
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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