DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and mmp15a

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_001924042.5 Gene:mmp15a / 561041 ZFINID:ZDB-GENE-070817-4 Length:651 Species:Danio rerio


Alignment Length:683 Identity:198/683 - (28%)
Similarity:288/683 - (42%) Gaps:180/683 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 AKTAISEDIMYN---YLMQFDYLPKSDLETGALRTEDQLKEAIRSLQSFGNITVTGEIDSATARL 102
            |:|: :||..:|   :|..:.||.::..:...:::...|..|||.:|.|..:..||.:||.|.|.
Zfish    24 AETS-AEDEDFNAESWLRTYGYLSQASRQMSTMQSSQILSSAIRDMQRFYGLQETGHMDSETLRA 87

  Fly   103 IQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFALQGPKWSRTDLTWSMVNRSMPDASKVE-- 165
            :::|||||.|.....|          ....|.:||||.|.||::.:||:|:.|.| |...:.:  
Zfish    88 MKRPRCGVADHFEESS----------EGAARRKRFALTGHKWNQNNLTYSIQNHS-PKVGQQQTY 141

  Fly   166 RMVQTALDVWANHSKLTFREV-Y------SDQADIQILFARRAHGDGYKFDGPGQVLAHAFYPGE 223
            ..::.|..||...:.|.|.|: |      |:..||.:|||...|||...|||.|..|||||:||.
Zfish   142 EAIRKAFRVWEKVTPLQFEEIPYHKIKNGSEGPDIILLFASGYHGDMSLFDGEGGSLAHAFFPGP 206

  Fly   224 GRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLAHSAIPDAVMFPWYQNNEVAG-N 287
            |.|||.|||.||.|..:  ..:..|.:...||:|||||:|||.||..|.|:|.|:||..:... .
Zfish   207 GMGGDTHFDTDEPWTLN--QQEGSGVDLFLVAVHELGHALGLEHSNNPSAIMAPFYQWMDTESFA 269

  Fly   288 LPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTMRAMIYRADKPAYWPWNNPSNNPNNDRNR 352
            |.|||..||.|:||:.|.......|.||..|||.           ||      .|:..       
Zfish   270 LADDDINGIHQIYGSPETVTTQAAPTTTLFTTTA-----------KP------EPTTT------- 310

  Fly   353 ARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQEEERWRQEQERQEEENRRRKIEHKS 417
                                                             |.|.:..|        
Zfish   311 -------------------------------------------------EAQPKTTR-------- 318

  Fly   418 QWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRRERERDRQLEWERRNRNGAREPVTP 482
                 ||.:..||                                     |        ..||.|
Zfish   319 -----PSLQPTRP-------------------------------------W--------MPPVNP 333

  Fly   483 TANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSCMTYYDAISIIRGELFIFRGPYLWRIGTSGLY 547
            |     |.|.:|.||        ::..:..||.|...:|.::::|||:|:|:|.:.||:..:.:.
Zfish   334 T-----RRTYRPQPT--------SRSNQDAPDICEGNFDTVTMLRGEMFVFKGRWFWRVRRNRVL 385

  Fly   548 NGYPTEIRRHWSALPENLTKVDAVYENKQRQIVFFIGREYYVFNSVMLAPGFPKPL--ASLGLPP 610
            :.||..|...|..|||:   :||.||....:.|||.|.:|::|....:.||:|:.|  ...|:| 
Zfish   386 DNYPMPISFFWMGLPED---IDAAYERHDGKFVFFKGSKYWLFREADVEPGYPQDLFRYGQGMP- 446

  Fly   611 TLTHIDASFVWGHNNRTYMTSGTLYWRIDDYTGQVELDYPRDMSIWSGVGYNIDAAFQYLDGK-T 674
              ..:|.:..|..:..||...|..|||..:.:..::.|||:.:|:|..:..:...||...||. |
Zfish   447 --ERVDTAVWWEPSGYTYFFRGDRYWRFSEESRAMDKDYPKPVSVWGSIPVSPKGAFLSDDGAYT 509

  Fly   675 YFFKNLGYWEFNDDRMKVAHARAKLSARRWMQC 707
            ||:|...||.|::.||||.....:.....:|.|
Zfish   510 YFYKGTKYWRFDNKRMKVDSGYPRSILNDFMGC 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 16/53 (30%)
Peptidase_M10 143..301 CDD:425668 71/167 (43%)
HX 513..707 CDD:238046 64/196 (33%)
mmp15aXP_001924042.5 None

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