DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and MMP17

DIOPT Version :9

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_057239.4 Gene:MMP17 / 4326 HGNCID:7163 Length:603 Species:Homo sapiens


Alignment Length:714 Identity:210/714 - (29%)
Similarity:293/714 - (41%) Gaps:222/714 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LATLLALFAQSMCIQELSLPPEGSHSTAATRSKKAKTAISEDIM--YNYLMQFDYLPKSDLETGA 69
            |..||||..:..|......|.                  :||:.  ..:|.:|.|||.:|..||.
Human    25 LLLLLALGTRGGCAAPAPAPR------------------AEDLSLGVEWLSRFGYLPPADPTTGQ 71

  Fly    70 LRTEDQLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRV 134
            |:|:::|.:||.::|.||.:..||.:|.||..|::.|||.:.|.             .:.:..|.
Human    72 LQTQEELSKAITAMQQFGGLEATGILDEATLALMKTPRCSLPDL-------------PVLTQARR 123

  Fly   135 RRFALQGPKWSRTDLTWSMVNRSMPDAS-----KVERMVQTALDVWANHSKLTFREVYSDQADIQ 194
            ||.|....||::.:|:|.:  |:.|..|     .|..::..||.||::.:.|.|.||....||||
Human   124 RRQAPAPTKWNKRNLSWRV--RTFPRDSPLGHDTVRALMYYALKVWSDIAPLNFHEVAGSAADIQ 186

  Fly   195 ILFARRAHGDGYKFDGPGQVLAHAFYPGEGR-GGDAHFDADETWNFDGESDDSHGTNFLNVALHE 258
            |.|::..|.|||.|||||..:||||:||... .||.|||.||.|.|  .|.|:||.:...||:||
Human   187 IDFSKADHNDGYPFDGPGGTVAHAFFPGHHHTAGDTHFDDDEAWTF--RSSDAHGMDLFAVAVHE 249

  Fly   259 LGHSLGLAHSAIPDAVMFPWYQNNEVAGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTT 323
            .||::||:|.|...::|.|:||     |.:.|..|||:            ||:            
Human   250 FGHAIGLSHVAAAHSIMRPYYQ-----GPVGDPLRYGL------------PYE------------ 285

  Fly   324 MRAMIYRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEE 388
                    ||...|                                                   
Human   286 --------DKVRVW--------------------------------------------------- 291

  Fly   389 RQRQEEERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQ 453
                                                                             
Human   292 ----------------------------------------------------------------- 291

  Fly   454 EDRRRERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSCMT 518
                       ||       .|.||.|:|||. ...|...|.|..:|.   ...|||..|..|.|
Human   292 -----------QL-------YGVRESVSPTAQ-PEEPPLLPEPPDNRS---SAPPRKDVPHRCST 334

  Fly   519 YYDAISIIRGELFIFRGPYLWRIGTS-GLYNGYPTEIRRHWSALPENLTKVDAVYE-NKQRQIVF 581
            ::||::.||||.|.|:|.|.||:... .|.:..|.::.|.|..||.:|..|||||| ....:|||
Human   335 HFDAVAQIRGEAFFFKGKYFWRLTRDRHLVSLQPAQMHRFWRGLPLHLDSVDAVYERTSDHKIVF 399

  Fly   582 FIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRTYMTSGTLYWRIDDYTGQVE 646
            |.|..|:||....:..|:|:|::...|||  ..|||:|.|.||:|||.....||||.||:|..::
Human   400 FKGDRYWVFKDNNVEEGYPRPVSDFSLPP--GGIDAAFSWAHNDRTYFFKDQLYWRYDDHTRHMD 462

  Fly   647 LDYPRDMSIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARRWMQCARS 710
            ..||....:|.||...:|.|.::.||.:|||:...||:..|..::||....:.:||.|:.|..|
Human   463 PGYPAQSPLWRGVPSTLDDAMRWSDGASYFFRGQEYWKVLDGELEVAPGYPQSTARDWLVCGDS 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 Peptidase_M10 143..301 CDD:278824 69/163 (42%)
ZnMc_MMP 143..301 CDD:239805 69/163 (42%)
HX 513..707 CDD:238046 79/195 (41%)
MMP17NP_057239.4 PG_binding_1 47..105 CDD:279773 23/57 (40%)
Cysteine switch. /evidence=ECO:0000250 108..115 3/6 (50%)
Peptidase_M10 132..295 CDD:278824 76/337 (23%)
ZnMc_MMP 132..295 CDD:239805 76/337 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..329 10/31 (32%)
HX 329..523 CDD:238046 79/195 (41%)
Hemopexin 1 333..378 17/44 (39%)
Hemopexin 2 382..427 18/44 (41%)
Hemopexin 3 428..475 21/48 (44%)
Hemopexin 4 476..523 15/46 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..571
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11824
eggNOG 1 0.900 - - E1_KOG1565
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22669
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1075463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X44
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.820

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