DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and MMP3

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_002413.1 Gene:MMP3 / 4314 HGNCID:7173 Length:477 Species:Homo sapiens


Alignment Length:713 Identity:189/713 - (26%)
Similarity:265/713 - (37%) Gaps:256/713 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLALFAQSMCIQELSLPPEGSHSTAATRSKKAKTAISEDIMYNYLMQFDYLPKSDLETGALRTED 74
            :|.|...::|   .:.|.:|     |.|.:.....:.:..:.||     |..|.|::....|.:.
Human     6 ILLLLCVAVC---SAYPLDG-----AARGEDTSMNLVQKYLENY-----YDLKKDVKQFVRRKDS 57

  Fly    75 -QLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFA 138
             .:.:.||.:|.|..:.|||::||.|..:::||||||.|               :|   ..|.| 
Human    58 GPVVKKIREMQKFLGLEVTGKLDSDTLEVMRKPRCGVPD---------------VG---HFRTF- 103

  Fly   139 LQG-PKWSRTDLTWSMVNRSMPDASK--VERMVQTALDVWANHSKLTFREVYSDQADIQILFARR 200
             .| |||.:|.||:.:||.: ||..|  |:..|:.||.||...:.|||..:|..:|||.|.||.|
Human   104 -PGIPKWRKTHLTYRIVNYT-PDLPKDAVDSAVEKALKVWEEVTPLTFSRLYEGEADIMISFAVR 166

  Fly   201 AHGDGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGL 265
            .|||.|.|||||.|||||:.||.|..||||||.||.|     :.|:.|||...||.||:||||||
Human   167 EHGDFYPFDGPGNVLAHAYAPGPGINGDAHFDDDEQW-----TKDTTGTNLFLVAAHEIGHSLGL 226

  Fly   266 AHSAIPDAVMFPWYQN--NEVAGNLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTMRAMI 328
            .|||..:|:|:|.|.:  :.....|..||..|||.|||..     |..|:|              
Human   227 FHSANTEALMYPLYHSLTDLTRFRLSQDDINGIQSLYGPP-----PDSPET-------------- 272

  Fly   329 YRADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQE 393
                                                                             
Human   273 ----------------------------------------------------------------- 272

  Fly   394 EERWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRR 458
                                                                             
Human   273 ----------------------------------------------------------------- 272

  Fly   459 ERERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSC--MTYYD 521
                                |:.||....|.|..                    |.:|  ...:|
Human   273 --------------------PLVPTEPVPPEPGT--------------------PANCDPALSFD 297

  Fly   522 AISIIRGELFIFRGPYLWRIGTSGLYNGYPTEIRRH-----WSALPENLTKVDAVYENKQRQIVF 581
            |:|.:|||:.||:..:.||.....|      |...|     |.:||..   |||.||...:.:||
Human   298 AVSTLRGEILIFKDRHFWRKSLRKL------EPELHLISSFWPSLPSG---VDAAYEVTSKDLVF 353

  Fly   582 -FIGREYYVFNSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNRTYMTSGTLYWRIDDYTGQV 645
             |.|.:::......:..|:|:.:.:||.|||:..|||:......|:||......|||.|:....:
Human   354 IFKGNQFWAIRGNEVRAGYPRGIHTLGFPPTVRKIDAAISDKEKNKTYFFVEDKYWRFDEKRNSM 418

  Fly   646 ELDYPRDMS-IWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARRWMQC 707
            |..:|:.:: .:.|:...|||.|:.. |..|||......||:.:..||.|.   |.:..|:.|
Human   419 EPGFPKQIAEDFPGIDSKIDAVFEEF-GFFYFFTGSSQLEFDPNAKKVTHT---LKSNSWLNC 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 16/51 (31%)
Peptidase_M10 143..301 CDD:425668 81/161 (50%)
HX 513..707 CDD:238046 62/202 (31%)
MMP3NP_002413.1 PG_binding_1 25..87 CDD:460223 17/66 (26%)
Cysteine switch. /evidence=ECO:0000250 90..97 6/21 (29%)
Peptidase_M10 108..264 CDD:425668 81/161 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 262..287 11/213 (5%)
HX 287..477 CDD:238046 62/202 (31%)
Hemopexin 1 287..336 16/54 (30%)
Hemopexin 2 337..383 14/48 (29%)
Hemopexin 3 385..433 12/47 (26%)
Hemopexin 4 434..477 15/46 (33%)

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