DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mmp2 and Mmp27

DIOPT Version :10

Sequence 1:NP_995788.1 Gene:Mmp2 / 35997 FlyBaseID:FBgn0033438 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001297646.1 Gene:Mmp27 / 234911 MGIID:3039232 Length:525 Species:Mus musculus


Alignment Length:752 Identity:173/752 - (23%)
Similarity:265/752 - (35%) Gaps:257/752 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLALFAQSMCIQELSLPPEGSHSTAATRSKKAKTAISEDIMYNYLMQFDYLPKSDLETGALRTED 74
            ||:|....:.: ..:.||:          :|.|...:..:...||.||..|..........:...
Mouse    18 LLSLMVNFITL-SAAFPPD----------RKDKNEENNQLAQAYLNQFYSLEIEGSHFVQSKNRS 71

  Fly    75 QLKEAIRSLQSFGNITVTGEIDSATARLIQKPRCGVGDRRSADSFSPDNLYHEIGSNVRVRRFAL 139
            .....:|.:|:|..:||||::||.|..:::.|||||.|                     |.::..
Mouse    72 LFDGKLREMQAFFGLTVTGKLDSDTLAIMKVPRCGVPD---------------------VGQYGY 115

  Fly   140 QGPKWSRTDLTWSMVNRSMPD--ASKVERMVQTALDVWANHSKLTFREVYSDQADIQILFARRAH 202
            ..|.|.:..||:.::|.: ||  .:.|:..:|.||.||:..:.|||..:....|||.|.|....|
Mouse   116 TLPGWRKYSLTYRIMNYT-PDMTPADVDEAIQKALQVWSKVTPLTFTRISKGVADIMIAFRTGVH 179

  Fly   203 G-DGYKFDGPGQVLAHAFYPGEGRGGDAHFDADETWNFDGESDDSHGTNFLNVALHELGHSLGLA 266
            | ....||||..||.|||.||.|.|||.|||.||||    .:.|..|.|...||.||.||||||:
Mouse   180 GWCPRHFDGPLGVLGHAFPPGLGLGGDTHFDEDETW----IAKDGEGFNLFLVAAHEFGHSLGLS 240

  Fly   267 HSAIPDAVMFPWYQNNEVAG-NLPDDDRYGIQQLYGTKEKTWGPYKPQTTTTTTTTTTMRAMIYR 330
            ||....|:|||.|.:.:.:. .|..||..|||.:||:        .|:.||              
Mouse   241 HSNDQTALMFPNYISLDPSKYPLSQDDIDGIQSIYGS--------PPKVTT-------------- 283

  Fly   331 ADKPAYWPWNNPSNNPNNDRNRARERQEEERRRQEKERRRQEEERRHQEEERRRQVEERQRQEEE 395
                                                                             
Mouse   284 ----------------------------------------------------------------- 283

  Fly   396 RWRQEQERQEEENRRRKIEHKSQWERNPSKERNRPRERQEMERRRQEQERQEQERQEQEDRRRER 460
                                                                             
Mouse   284 ----------------------------------------------------------------- 283

  Fly   461 ERDRQLEWERRNRNGAREPVTPTANTTPRPTNKPYPTVHRQHHHHNKPRKPKPDSCMTYYDAISI 525
                                .|:.|:.|...:   ||:                    .:|||:.
Mouse   284 --------------------KPSGNSEPHACD---PTL--------------------TFDAITT 305

  Fly   526 IRGELFIFRGPYLWRIGTSGLYNGYPTEIRRHWSALPENLTKVDAVYENKQRQIVFFIGREYYVF 590
            .|.|:..|:|.:|||: .|.:.......|...|.:||.:|   .|.||:.:.:::.|....::|.
Mouse   306 FRREVMFFKGRHLWRV-YSDIAGAEFEFIDSFWPSLPADL---QAAYESPRDELLVFKDENFWVI 366

  Fly   591 NSVMLAPGFPKPLASLGLPPTLTHIDASFVWGHNNR-TYMTSGTLYWRIDDYTGQVELDYP-RDM 653
            ....:.||:||.:.:||.|..:..|||: |..|:.| |:...|...||.|:....::..:| |.:
Mouse   367 RGYSVLPGYPKSIHTLGFPRRVKKIDAA-VCDHDTRKTFFFVGIWCWRYDEMAQAMDRGFPQRII 430

  Fly   654 SIWSGVGYNIDAAFQYLDGKTYFFKNLGYWEFNDDRMKVAHARAKLSARRWMQCARSANEVDDEQ 718
            ..:.|:...:||.||: :|..|||.....:|::   ||..:....:....|..|....|     .
Mouse   431 KCFPGIRLRVDAVFQH-NGFLYFFHGSRQFEYD---MKAKNITQVIKTNSWFLCNEPLN-----A 486

  Fly   719 RWTASLVSEGEETGRSGSRELRINHFILSILLLAIAN 755
            .:..|:..:....|     .:.::|..||:|..:|.:
Mouse   487 SFNVSVKGKANSIG-----TVILHHKRLSLLTFSIVH 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mmp2NP_995788.1 PG_binding_1 52..103 CDD:460223 15/50 (30%)
Peptidase_M10 143..301 CDD:425668 70/161 (43%)
HX 513..707 CDD:238046 54/195 (28%)
Mmp27NP_001297646.1 PG_binding_1 45..100 CDD:460223 15/54 (28%)
Peptidase_M10 120..276 CDD:425668 70/160 (44%)
HX 291..480 CDD:238046 57/220 (26%)

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